WormBase Tree Display for Gene: WBGene00011033

WBGene00011033 SMap: S_parent: Sequence: R05D11
  Identity: Version: 2
    Name: CGC_name: tmem-208
      Sequence_name: R05D11.5
      Molecular_name: R05D11.5
        R05D11.5.1
        CE27195
      Other_name: CELE_R05D11.5 Accession_evidence: NDB BX284601
      Public_name: tmem-208
    DB_info: Database: AceView gene 1J169
        WormQTL gene WBGene00011033
        WormFlux gene WBGene00011033
        NDB locus_tag CELE_R05D11.5
        Panther gene CAEEL|WormBase=WBGene00011033|UniProtKB=Q21737
          family PTHR13505
        NCBI gene 172649
        RefSeq protein NM_059922.7
        TREEFAM TREEFAM_ID TF318118
        TrEMBL UniProtAcc Q21737
        UniProt_GCRP UniProtAcc Q21737
    Species: Caenorhabditis elegans
    History: Version_change: 1 26 May 2004 16:54:52 WBPerson1971 Event: Imported: Initial conversion from CDS class of WS125
        2 15 Oct 2019 15:58:06 WBPerson1983 Name_change: CGC_name: tmem-208
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: tmem
    Allele (17)
    RNASeq_FPKM (74)
    GO_annotation: 00072578
      00072579
      00072580
      00072581
      00072582
      00072583
    Contained_in_operon: CEOP1484
    Ortholog (34)
    Structured_description: Automated_description: Predicted to be involved in vacuolar protein processing. Predicted to be located in endoplasmic reticulum membrane and vacuole. Is an ortholog of human TMEM208 (transmembrane protein 208). Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: R05D11.5
    Corresponding_CDS_history: R05D11.5:wp47
    Corresponding_transcript: R05D11.5.1
    Other_sequence (32)
    Associated_feature: WBsf218167
  Experimental_info: RNAi_result: WBRNAi00051269 Inferred_automatically: RNAi_primary
    Expr_pattern: Expr1014021
      Expr1034837
      Expr1154971
      Expr2005387
      Expr2023607
    Drives_construct: WBCnstr00030979
    Construct_product: WBCnstr00030979
    Microarray_results (17)
    Expression_cluster (89)
    SAGE_tag: SAGE:gtagaaggaa Strand: Antisense
      SAGE:gtagaaggaatccagca Strand: Antisense
      SAGE:ttttggatgctggtgcc Strand: Sense
        Unambiguously_mapped
      SAGE:gttgaccgctggatcag Strand: Sense
        Unambiguously_mapped
      SAGE:ctaatcgtgc Strand: Antisense
      SAGE:ctaatcgtgctagccac Strand: Antisense
      SAGE:aaaagaatag Strand: Antisense
      SAGE:gttgaccgct Strand: Sense
        Unambiguously_mapped
      SAGE:ttttggatgc Strand: Sense
        Unambiguously_mapped
    Interaction (59)
  Map_info: Map: I Position: 2.98359
    Positive: Positive_clone: R05D11 Inferred_automatically: From sequence, transcript, pseudogene data
    Pseudo_map_position
  Reference: WBPaper00036306
    WBPaper00038491
    WBPaper00055090
  Remark: Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. CGC_data_submission
  Method: Gene