WormBase Tree Display for Gene: WBGene00011068

WBGene00011068 SMap: S_parent: Sequence: R06F6
  Identity: Version: 2
    Name: CGC_name: set-14 Person_evidence: WBPerson1730
            WBPerson268
            WBPerson632
      Sequence_name: R06F6.4
      Molecular_name: R06F6.4
        R06F6.4.1
        CE16303
      Other_name: CELE_R06F6.4 Accession_evidence: NDB BX284602
      Public_name: set-14
    DB_info: Database: AceView gene 2L84
        WormQTL gene WBGene00011068
        WormFlux gene WBGene00011068
        NDB locus_tag CELE_R06F6.4
        Panther gene CAEEL|WormBase=WBGene00011068|UniProtKB=Q09415
          family PTHR12197
        NCBI gene 174662
        RefSeq protein NM_063922.7
        SwissProt UniProtAcc Q09415
        TREEFAM TREEFAM_ID TF106487
        UniProt_GCRP UniProtAcc Q09415
    Species: Caenorhabditis elegans
    History: Version_change: 1 26 May 2004 16:54:52 WBPerson1971 Event: Imported: Initial conversion from CDS class of WS125
        2 03 May 2007 10:33:07 WBPerson2970 Name_change: CGC_name: set-14
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: set
    Allele (38)
    Strain: WBStrain00051883
    RNASeq_FPKM (74)
    GO_annotation: 00053753
      00053754
      00053755
      00053756
      00053757
    Contained_in_operon: CEOP2504
    Ortholog (35)
    Paralog: WBGene00009370 Caenorhabditis elegans From_analysis: Panther
            WormBase-Compara
      WBGene00022499 Caenorhabditis elegans From_analysis: Panther
            WormBase-Compara
      WBGene00007403 Caenorhabditis elegans From_analysis: WormBase-Compara
      WBGene00044070 Caenorhabditis elegans From_analysis: WormBase-Compara
    Structured_description: Concise_description: set-14 encodes a divergent ortholog of human SMYD1 (OMIM:606846), SMYD2 (OMIM:610663), and SYMD3 (OMIM:608783); SET-14 is paralogous to SET-10, SET-18, and SET-30; SET-14 has no obvious function in individual RNAi assays of vulval development, or in mass RNAi assays. Paper_evidence: WBPaper00030864
          Curator_confirmed: WBPerson567
          Date_last_updated: 08 Oct 2007 00:00:00
      Automated_description: Predicted to enable DNA binding activity and metal ion binding activity. Predicted to be located in nucleus. Expressed in hypodermis; intestine; and neurons. Is an ortholog of human SMYD1 (SET and MYND domain containing 1) and SMYD2 (SET and MYND domain containing 2). Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: R06F6.4
    Corresponding_transcript: R06F6.4.1
    Other_sequence: CRC02938_1
      CR03307
    Associated_feature: WBsf223838
      WBsf223839
  Experimental_info: RNAi_result: WBRNAi00002284 Inferred_automatically: RNAi_primary
      WBRNAi00113449 Inferred_automatically: RNAi_primary
      WBRNAi00051396 Inferred_automatically: RNAi_primary
      WBRNAi00017491 Inferred_automatically: RNAi_primary
      WBRNAi00062331 Inferred_automatically: RNAi_primary
      WBRNAi00034668 Inferred_automatically: RNAi_primary
      WBRNAi00091481 Inferred_automatically: RNAi_primary
    Expr_pattern: Expr14360
      Expr1011276
      Expr1034862
      Expr1155086
      Expr2015758
      Expr2033991
    Drives_construct: WBCnstr00030957
    Construct_product: WBCnstr00030957
    Microarray_results (19)
    Expression_cluster (100)
    Interaction (13)
  Map_info: Map: II Position: 3.12713 Error: 6.2e-05
    Positive: Positive_clone: R06F6 Inferred_automatically: From sequence, transcript, pseudogene data
    Pseudo_map_position
  Reference: WBPaper00030864
    WBPaper00036383
    WBPaper00038372
    WBPaper00038491
    WBPaper00055090
    WBPaper00065308
  Remark: Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. CGC_data_submission
  Method: Gene