WormBase Tree Display for Gene: WBGene00011150
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| WBGene00011150 | SMap | S_parent | Sequence | R08H2 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 2 | |||||||
| Name | CGC_name | nhr-269 | Person_evidence | WBPerson600 | |||||
| Sequence_name | R08H2.9 | ||||||||
| Molecular_name | R08H2.9 | ||||||||
| R08H2.9.1 | |||||||||
| CE52166 | |||||||||
| Other_name | CELE_R08H2.9 | Accession_evidence | NDB | BX284605 | |||||
| Public_name | nhr-269 | ||||||||
| DB_info | Database | AceView | gene | 5P848 | |||||
| WormQTL | gene | WBGene00011150 | |||||||
| WormFlux | gene | WBGene00011150 | |||||||
| NDB | locus_tag | CELE_R08H2.9 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00011150|UniProtKB=O17991 | |||||||
| family | PTHR46587 | ||||||||
| NCBI | gene | 187716 | |||||||
| RefSeq | protein | NM_001356765.1 | |||||||
| TREEFAM | TREEFAM_ID | TF317146 | |||||||
| TrEMBL | UniProtAcc | O17991 | |||||||
| UniProt_GCRP | UniProtAcc | O17991 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 26 May 2004 16:54:52 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of WS125 | ||
| 2 | 22 Jul 2005 10:29:12 | WBPerson2970 | Name_change | CGC_name | nhr-269 | ||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | nhr | ||||||||
| Allele (29) | |||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation | 00031214 | ||||||||
| 00031215 | |||||||||
| 00031216 | |||||||||
| 00118433 | |||||||||
| 00118434 | |||||||||
| 00118435 | |||||||||
| 00118436 | |||||||||
| Ortholog (43) | |||||||||
| Paralog (218) | |||||||||
| Structured_description | Automated_description | Predicted to enable DNA-binding transcription factor activity; sequence-specific DNA binding activity; and zinc ion binding activity. Predicted to be involved in regulation of DNA-templated transcription. Predicted to be located in nucleus. | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | R08H2.9 | |||||||
| Corresponding_CDS_history | R08H2.9:wp183 | ||||||||
| R08H2.9:wp261 | |||||||||
| Corresponding_transcript | R08H2.9.1 | ||||||||
| Associated_feature | WBsf1002265 | ||||||||
| WBsf1021000 | |||||||||
| Transcription_factor | WBTranscriptionFactor000908 | ||||||||
| Experimental_info | RNAi_result | WBRNAi00051576 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00064594 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00017614 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr1026042 | ||||||||
| Expr1155249 | |||||||||
| Expr2014158 | |||||||||
| Expr2032402 | |||||||||
| Drives_construct | WBCnstr00030892 | ||||||||
| Construct_product | WBCnstr00030892 | ||||||||
| Microarray_results (18) | |||||||||
| Expression_cluster (30) | |||||||||
| Interaction (56) | |||||||||
| Map_info | Map | V | Position | 7.92147 | Error | 0.002514 | |||
| Positive | Positive_clone | R08H2 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Mapping_data | Multi_point | 5380 | |||||||
| 4246 | |||||||||
| 4966 | |||||||||
| Pseudo_map_position | |||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
