WormBase Tree Display for Gene: WBGene00011268
expand all nodes | collapse all nodes | view schema
| WBGene00011268 | SMap | S_parent | Sequence | R17 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 2 | |||||||
| Name | CGC_name | pde-12 | Person_evidence | WBPerson150 | |||||
| WBPerson433 | |||||||||
| Sequence_name | R17.2 | ||||||||
| Molecular_name | R17.2 | ||||||||
| R17.2.1 | |||||||||
| CE16315 | |||||||||
| Other_name | CELE_R17.2 | Accession_evidence | NDB | BX284603 | |||||
| Public_name | pde-12 | ||||||||
| DB_info | Database | AceView | gene | 3L930 | |||||
| WormQTL | gene | WBGene00011268 | |||||||
| WormFlux | gene | WBGene00011268 | |||||||
| NDB | locus_tag | CELE_R17.2 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00011268|UniProtKB=O18005 | |||||||
| family | PTHR12121 | ||||||||
| NCBI | gene | 176514 | |||||||
| RefSeq | protein | NM_066987.5 | |||||||
| TREEFAM | TREEFAM_ID | TF323175 | |||||||
| TrEMBL | UniProtAcc | O18005 | |||||||
| UniProt_GCRP | UniProtAcc | O18005 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 26 May 2004 16:54:52 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of WS125 | ||
| 2 | 02 Apr 2013 15:18:46 | WBPerson2970 | Name_change | CGC_name | pde-12 | ||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | pde | ||||||||
| Allele (94) | |||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation | 00031227 | ||||||||
| 00031228 | |||||||||
| 00118524 | |||||||||
| Ortholog (30) | |||||||||
| Paralog | WBGene00000376 | Caenorhabditis elegans | From_analysis | TreeFam | |||||
| Panther | |||||||||
| WormBase-Compara | |||||||||
| WBGene00020955 | Caenorhabditis elegans | From_analysis | Panther | ||||||
| WormBase-Compara | |||||||||
| Structured_description | Automated_description | Predicted to enable poly(A)-specific ribonuclease activity. Is an ortholog of human PDE12 (phosphodiesterase 12). | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | R17.2 | |||||||
| Corresponding_transcript | R17.2.1 | ||||||||
| Other_sequence (17) | |||||||||
| Associated_feature | WBsf651487 | ||||||||
| WBsf667425 | |||||||||
| WBsf994168 | |||||||||
| WBsf994169 | |||||||||
| WBsf1015869 | |||||||||
| WBsf227527 | |||||||||
| WBsf227528 | |||||||||
| Experimental_info | RNAi_result | WBRNAi00006334 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00034952 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00052003 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00017887 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00001720 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr1011373 | ||||||||
| Expr1034947 | |||||||||
| Expr1155645 | |||||||||
| Expr2014793 | |||||||||
| Expr2033027 | |||||||||
| Drives_construct | WBCnstr00030793 | ||||||||
| Construct_product | WBCnstr00030793 | ||||||||
| Microarray_results (18) | |||||||||
| Expression_cluster (124) | |||||||||
| Interaction (11) | |||||||||
| Map_info | Map | III | Position | 5.42754 | |||||
| Positive | Positive_clone | R17 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Pseudo_map_position | |||||||||
| Reference | WBPaper00029208 | ||||||||
| WBPaper00038491 | |||||||||
| WBPaper00043886 | |||||||||
| WBPaper00055090 | |||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
