WormBase Tree Display for Gene: WBGene00011407
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| WBGene00011407 | SMap | S_parent | Sequence | T04A8 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 2 | |||||||
| Name | CGC_name | ppat-1 | Person_evidence | WBPerson10610 | |||||
| Sequence_name | T04A8.5 | ||||||||
| Molecular_name | T04A8.5 | ||||||||
| T04A8.5.1 | |||||||||
| CE01074 | |||||||||
| Other_name | CELE_T04A8.5 | Accession_evidence | NDB | BX284603 | |||||
| Public_name | ppat-1 | ||||||||
| DB_info | Database (12) | ||||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 26 May 2004 16:54:52 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of WS125 | ||
| 2 | 27 Jun 2014 15:53:55 | WBPerson2970 | Name_change | CGC_name | ppat-1 | ||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | ppat | ||||||||
| Allele (29) | |||||||||
| Strain | WBStrain00001546 | ||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation (13) | |||||||||
| Ortholog (28) | |||||||||
| Structured_description | Automated_description | Predicted to enable amidophosphoribosyltransferase activity. Predicted to be involved in purine nucleotide biosynthetic process. Expressed in intestine. Is an ortholog of human PPAT (phosphoribosyl pyrophosphate amidotransferase). | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | T04A8.5 | |||||||
| Corresponding_transcript | T04A8.5.1 | ||||||||
| Other_sequence (31) | |||||||||
| Associated_feature | WBsf645112 | ||||||||
| WBsf658853 | |||||||||
| WBsf224777 | |||||||||
| WBsf224778 | |||||||||
| Experimental_info | RNAi_result | WBRNAi00052341 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00018115 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00052342 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00005107 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00035119 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00002700 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Chronogram215 | ||||||||
| Expr6592 | |||||||||
| Expr1021858 | |||||||||
| Expr1155974 | |||||||||
| Expr2015005 | |||||||||
| Expr2033240 | |||||||||
| Drives_construct | WBCnstr00002388 | ||||||||
| WBCnstr00030682 | |||||||||
| Construct_product | WBCnstr00030682 | ||||||||
| Microarray_results (19) | |||||||||
| Expression_cluster (176) | |||||||||
| Interaction (55) | |||||||||
| Map_info | Map | III | Position | -2.90868 | |||||
| Positive | Positive_clone | T04A8 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Pseudo_map_position | |||||||||
| Reference | WBPaper00038491 | ||||||||
| WBPaper00055090 | |||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
