WormBase Tree Display for Gene: WBGene00011422
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| WBGene00011422 | SMap | S_parent | Sequence | T04B2 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 1 | |||||||
| Name | Sequence_name | T04B2.3 | |||||||
| Molecular_name | T04B2.3a | ||||||||
| T04B2.3a.1 | |||||||||
| CE23944 | |||||||||
| T04B2.3b | |||||||||
| CE40118 | |||||||||
| T04B2.3b.1 | |||||||||
| Other_name | CELE_T04B2.3 | Accession_evidence | NDB | BX284604 | |||||
| Public_name | T04B2.3 | ||||||||
| DB_info | Database | AceView | gene | 4K813 | |||||
| WormQTL | gene | WBGene00011422 | |||||||
| WormFlux | gene | WBGene00011422 | |||||||
| NDB | locus_tag | CELE_T04B2.3 | |||||||
| NCBI | gene | 177868 | |||||||
| RefSeq | protein | NM_001047518.3 | |||||||
| NM_001047517.2 | |||||||||
| TREEFAM | TREEFAM_ID | TF316189 | |||||||
| TrEMBL | UniProtAcc | Q22147 | |||||||
| Q1NZ27 | |||||||||
| UniProt_GCRP | UniProtAcc | Q22147 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 26 May 2004 16:54:52 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of WS125 | ||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Allele (45) | |||||||||
| RNASeq_FPKM (74) | |||||||||
| Ortholog (21) | |||||||||
| Structured_description | Automated_description | Enriched in body wall musculature; muscle cell; neurons; pharynx; and somatic nervous system based on Chronogram; microarray; tiling array; RNA-seq; proteomic; and single-cell RNA-seq studies. Is affected by several genes including skn-1; dpy-10; and let-60 based on RNA-seq; microarray; and proteomic studies. Is affected by fifteen chemicals including methylmercury hydroxide; rotenone; and stavudine based on RNA-seq and microarray studies. Is predicted to encode a protein with the following domain: Phosphorylation site. | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | T04B2.3a | |||||||
| T04B2.3b | |||||||||
| Corresponding_transcript | T04B2.3a.1 | ||||||||
| T04B2.3b.1 | |||||||||
| Other_sequence | Acan_isotig14682 | ||||||||
| Dviv_isotig16388 | |||||||||
| Tcol_isotig12392 | |||||||||
| ACC32779_1 | |||||||||
| Tcol_isotig06234 | |||||||||
| Name_isotig03471 | |||||||||
| Oden_isotig20043 | |||||||||
| EX550434.1 | |||||||||
| Tcol_isotig06235 | |||||||||
| EX548946.1 | |||||||||
| Associated_feature | WBsf646277 | ||||||||
| WBsf646278 | |||||||||
| WBsf646279 | |||||||||
| WBsf718169 | |||||||||
| WBsf997541 | |||||||||
| WBsf997542 | |||||||||
| WBsf1018039 | |||||||||
| WBsf228923 | |||||||||
| Experimental_info | RNAi_result | WBRNAi00052352 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00018120 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Chronogram942 | ||||||||
| Chronogram1219 | |||||||||
| Expr1028164 | |||||||||
| Expr1035026 | |||||||||
| Expr1155980 | |||||||||
| Expr2005801 | |||||||||
| Expr2024018 | |||||||||
| Drives_construct | WBCnstr00030669 | ||||||||
| Construct_product | WBCnstr00030669 | ||||||||
| Microarray_results (24) | |||||||||
| Expression_cluster (170) | |||||||||
| Interaction | WBInteraction000503242 | ||||||||
| WBInteraction000578807 | |||||||||
| WBInteraction000583735 | |||||||||
| WBInteraction000584123 | |||||||||
| Map_info | Positive | Positive_clone | T04B2 | Inferred_automatically | From sequence, transcript, pseudogene data | ||||
| Interpolated_map_position | IV | 4.4736 | |||||||
| Method | Gene |
