WormBase Tree Display for Gene: WBGene00011459
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| WBGene00011459 | SMap | S_parent | Sequence | T05A6 | ||||||
|---|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 2 | ||||||||
| Name | Sequence_name | T05A6.5 | ||||||||
| Molecular_name | T05A6.5 | |||||||||
| Other_name | CELE_T05A6.5 | Accession_evidence | NDB | BX284602 | ||||||
| Public_name | T05A6.5 | |||||||||
| DB_info | Database | AceView | gene | 2I115 | ||||||
| WormQTL | gene | WBGene00011459 | ||||||||
| NDB | locus_tag | CELE_T05A6.5 | ||||||||
| NCBI | gene | 188080 | ||||||||
| Species | Caenorhabditis elegans | |||||||||
| History | Version_change | 1 | 26 May 2004 16:54:52 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of WS125 | |||
| 2 | 09 Dec 2008 10:11:24 | WBPerson1983 | Event | Changed_class | CDS | Pseudogene | ||||
| Status | Live | |||||||||
| Gene_info | Biotype | SO:0000336 | ||||||||
| Allele (35) | ||||||||||
| RNASeq_FPKM (74) | ||||||||||
| Paralog | WBGene00012542 | Caenorhabditis elegans | From_analysis | modENCODE_Pseudogenes | ||||||
| Structured_description | Automated_description | Is affected by several genes including let-60; sir-2.1; and clk-1 based on tiling array; microarray; and RNA-seq studies. Is affected by adsorbable organic bromine compound based on microarray studies. | Paper_evidence | WBPaper00065943 | ||||||
| Curator_confirmed | WBPerson324 | |||||||||
| WBPerson37462 | ||||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | |||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | |||||||||
| Molecular_info | Corresponding_CDS_history | T05A6.5:wp106 | ||||||||
| T05A6.5:wp198 | ||||||||||
| Corresponding_pseudogene | T05A6.5 | |||||||||
| Experimental_info | Microarray_results | SMD_T05A6.5 | ||||||||
| 178567_at | ||||||||||
| A_12_P105846 | ||||||||||
| Aff_T05A6.5 | ||||||||||
| GPL19516_CGZ0033287 | ||||||||||
| GPL21109_T05A6.5 | ||||||||||
| GPL8304_CE_WBGene00011459_A | ||||||||||
| GPL8673_T05A6_5P00018 | ||||||||||
| GPL8673_T05A6_5P00623 | ||||||||||
| Expression_cluster | WBPaper00042477:rsr-2(RNAi)_upregulated_TilingArray | |||||||||
| WBPaper00045217:prg-1_progressively_regulated | ||||||||||
| WBPaper00045774:clk-1_downregulated | ||||||||||
| WBPaper00062325:muscle_enriched_noncoding-RNA | ||||||||||
| cgc4489_group_9 | ||||||||||
| WBPaper00026929:sir-2.1_overexpression_regulated | ||||||||||
| WBPaper00041939:control_vs_EtBr-exposed_48h | ||||||||||
| WBPaper00046853:AOBr_M.aeruginosa-batch-culture_upregulated | ||||||||||
| [cgc5376]:let-60(G12V)-regulated_genes | ||||||||||
| [cgc6390]:male_sex-enriched | ||||||||||
| Interaction (80) | ||||||||||
| Map_info | Positive | Positive_clone | T05A6 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Interpolated_map_position | II | 0.575004 | ||||||||
| Method | Gene |
