WormBase Tree Display for Gene: WBGene00011484
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WBGene00011484 | SMap | S_parent | Sequence | T05E11 | |||||
---|---|---|---|---|---|---|---|---|---|
Identity | Version | 2 | |||||||
Name | CGC_name | srlf-24 | Person_evidence | WBPerson260 | |||||
Laboratory_evidence | OH | ||||||||
Sequence_name | T05E11.8 | ||||||||
Molecular_name | T05E11.8 | ||||||||
T05E11.8.1 | |||||||||
CE06367 | |||||||||
Other_name | T05E11.8 | ||||||||
CELE_T05E11.8 | Accession_evidence | NDB | BX284604 | ||||||
Public_name | srlf-24 | ||||||||
DB_info | Database | AceView | gene | 4L870 | |||||
WormQTL | gene | WBGene00011484 | |||||||
WormFlux | gene | WBGene00011484 | |||||||
NDB | locus_tag | CELE_T05E11.8 | |||||||
Panther | gene | CAEEL|WormBase=WBGene00011484|UniProtKB=Q22237 | |||||||
family | PTHR21593 | ||||||||
NCBI | gene | 188133 | |||||||
RefSeq | protein | NM_069674.2 | |||||||
TREEFAM | TREEFAM_ID | TF316074 | |||||||
TrEMBL | UniProtAcc | Q22237 | |||||||
UniProt_GCRP | UniProtAcc | Q22237 | |||||||
Species | Caenorhabditis elegans | ||||||||
History | Version_change | 1 | 26 May 2004 16:54:52 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of WS125 | ||
2 | 03 Oct 2022 15:59:20 | WBPerson21950 | Name_change | CGC_name | srlf-24 | ||||
Other_name | T05E11.8 | ||||||||
Status | Live | ||||||||
Gene_info | Biotype | SO:0001217 | |||||||
Gene_class | srlf | ||||||||
Allele (16) | |||||||||
RNASeq_FPKM (74) | |||||||||
Ortholog (23) | |||||||||
Paralog (39) | |||||||||
Structured_description | Automated_description | Enriched in several structures, including ABalppappa; ABarappppa; ABplpppaaa; PVR; and amphid sheath cell based on RNA-seq; single-cell RNA-seq; and microarray studies. Is affected by several genes including daf-16; daf-2; and daf-12 based on microarray; RNA-seq; and proteomic studies. Is affected by fourteen chemicals including methylmercuric chloride; rotenone; and Psoralens based on microarray and RNA-seq studies. Is predicted to encode a protein with the following domains: SXP/RAL-2 family protein Ani s 5-like, metal-binding domain and SXP/RAL-2 family protein Ani s 5-like, cation-binding domain. | Paper_evidence | WBPaper00065943 | |||||
Curator_confirmed | WBPerson324 | ||||||||
WBPerson37462 | |||||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
Molecular_info | Corresponding_CDS | T05E11.8 | |||||||
Corresponding_transcript | T05E11.8.1 | ||||||||
Associated_feature | WBsf652187 | ||||||||
WBsf668291 | |||||||||
WBsf668292 | |||||||||
WBsf997765 | |||||||||
WBsf230823 | |||||||||
Experimental_info | RNAi_result | WBRNAi00052517 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00018234 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00035208 | Inferred_automatically | RNAi_primary | |||||||
Expr_pattern | Expr1019754 | ||||||||
Expr1035055 | |||||||||
Expr1156141 | |||||||||
Expr2005882 | |||||||||
Expr2024098 | |||||||||
Drives_construct | WBCnstr00030620 | ||||||||
Construct_product | WBCnstr00030620 | ||||||||
Microarray_results (16) | |||||||||
Expression_cluster (91) | |||||||||
Interaction | WBInteraction000032200 | ||||||||
WBInteraction000453347 | |||||||||
WBInteraction000548537 | |||||||||
Map_info | Positive | Positive_clone | T05E11 | Inferred_automatically | From sequence, transcript, pseudogene data | ||||
Interpolated_map_position | IV | 4.86328 | |||||||
Method | Gene |