WormBase Tree Display for Gene: WBGene00011558
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WBGene00011558 | SMap | S_parent | Sequence | T07A5 | |||||
---|---|---|---|---|---|---|---|---|---|
Identity | Version | 2 | |||||||
Name | CGC_name | ostf-4 | Curator_confirmed | WBPerson1983 | |||||
Sequence_name | T07A5.5 | ||||||||
Molecular_name | T07A5.5 | ||||||||
T07A5.5.1 | |||||||||
CE36502 | |||||||||
Other_name | Ost4 | Paper_evidence | WBPaper00024178 | ||||||
CELE_T07A5.5 | Accession_evidence | NDB | BX284603 | ||||||
Public_name | ostf-4 | ||||||||
DB_info | Database | AceView | gene | 3L408 | |||||
WormFlux | gene | WBGene00011558 | |||||||
NDB | locus_tag | CELE_T07A5.5 | |||||||
NCBI | gene | 3565877 | |||||||
RefSeq | protein | NM_001379888.1 | |||||||
TrEMBL | UniProtAcc | Q6BEV3 | |||||||
UniProt_GCRP | UniProtAcc | Q6BEV3 | |||||||
Species | Caenorhabditis elegans | ||||||||
History | Version_change | 1 | 26 May 2004 16:54:52 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of WS125 | ||
2 | 09 Jul 2019 10:01:19 | WBPerson1983 | Name_change | CGC_name | ostf-4 | ||||
Status | Live | ||||||||
Gene_info | Biotype | SO:0001217 | |||||||
Gene_class | ostf | ||||||||
Allele | WBVar01500260 | ||||||||
WBVar00091637 | |||||||||
WBVar01499774 | |||||||||
WBVar00855766 | |||||||||
WBVar00093596 | |||||||||
Strain | WBStrain00036976 | ||||||||
RNASeq_FPKM (74) | |||||||||
GO_annotation | 00081934 | ||||||||
00081935 | |||||||||
00081936 | |||||||||
00081937 | |||||||||
Contained_in_operon | CEOP3832 | ||||||||
Ortholog (10) | |||||||||
Structured_description | Automated_description | Predicted to be located in endoplasmic reticulum membrane. Is an ortholog of human OST4 (oligosaccharyltransferase complex subunit 4, non-catalytic). | Paper_evidence | WBPaper00065943 | |||||
Curator_confirmed | WBPerson324 | ||||||||
WBPerson37462 | |||||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
Molecular_info | Corresponding_CDS | T07A5.5 | |||||||
Corresponding_transcript | T07A5.5.1 | ||||||||
Other_sequence (28) | |||||||||
Associated_feature | WBsf655480 | ||||||||
WBsf993968 | |||||||||
WBsf993969 | |||||||||
Experimental_info | Expr_pattern | Expr1025247 | |||||||
Expr1035093 | |||||||||
Expr1156303 | |||||||||
Expr2005949 | |||||||||
Expr2014656 | |||||||||
Expr2024166 | |||||||||
Expr2032889 | |||||||||
Drives_construct | WBCnstr00030562 | ||||||||
Construct_product | WBCnstr00030562 | ||||||||
Microarray_results | GPL13394_WBGene00011558 | ||||||||
GPL13914_T07A5.5 | |||||||||
GPL14144_T07A5.5_49-108_0.870_1_A | |||||||||
GPL19516_CGZ0033842 | |||||||||
GPL21109_T07A5.5 | |||||||||
GPL8304_CE_WBGene00011558_A | |||||||||
GPL8673_T07A5_5P00010 | |||||||||
GPL8673_T07A5_5P00018 | |||||||||
GPL8673_T07A5_5P00027 | |||||||||
Expression_cluster (63) | |||||||||
Map_info | Map | III | Position | 2.30985 | |||||
Positive | Positive_clone | T07A5 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
Pseudo_map_position | |||||||||
Reference | WBPaper00024178 | ||||||||
WBPaper00055090 | |||||||||
Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
Method | Gene |