WormBase Tree Display for Gene: WBGene00011620
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| WBGene00011620 | SMap | S_parent | Sequence | T08G3 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 1 | |||||||
| Name | Sequence_name | T08G3.11 | |||||||
| Molecular_name | T08G3.11 | ||||||||
| T08G3.11.1 | |||||||||
| CE42290 | |||||||||
| Other_name | CELE_T08G3.11 | Accession_evidence | NDB | BX284605 | |||||
| Public_name | T08G3.11 | ||||||||
| DB_info | Database | AceView | gene | 5Q950 | |||||
| WormQTL | gene | WBGene00011620 | |||||||
| WormFlux | gene | WBGene00011620 | |||||||
| NDB | locus_tag | CELE_T08G3.11 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00011620|UniProtKB=Q9XU54 | |||||||
| family | PTHR36946 | ||||||||
| NCBI | gene | 188302 | |||||||
| RefSeq | protein | NM_074767.2 | |||||||
| TrEMBL | UniProtAcc | Q9XU54 | |||||||
| UniProt_GCRP | UniProtAcc | Q9XU54 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 26 May 2004 16:54:52 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of WS125 | ||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Allele (54) | |||||||||
| RNASeq_FPKM (74) | |||||||||
| Ortholog | WBGene00083901 | Caenorhabditis remanei | From_analysis | Inparanoid_8 | |||||
| WBGene00065790 | Caenorhabditis remanei | From_analysis | Inparanoid_8 | ||||||
| chrV_pilon.g17163 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||||
| Paralog (11) | |||||||||
| Structured_description | Automated_description | Enriched in amphid sheath cell based on RNA-seq studies. Is affected by several genes including nhr-49; eri-1; and mdt-15 based on tiling array; RNA-seq; and microarray studies. Is affected by Ag nanoparticles; Atrazine; and fluoranthene based on RNA-seq and microarray studies. | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | T08G3.11 | |||||||
| Corresponding_CDS_history | T08G3.11:wp188 | ||||||||
| Corresponding_transcript | T08G3.11.1 | ||||||||
| Experimental_info | RNAi_result | WBRNAi00052888 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00018457 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr1026955 | ||||||||
| Expr1156486 | |||||||||
| Drives_construct | WBCnstr00030523 | ||||||||
| Construct_product | WBCnstr00030523 | ||||||||
| Microarray_results (15) | |||||||||
| Expression_cluster (19) | |||||||||
| Map_info | Positive | Positive_clone | T08G3 | Inferred_automatically | From sequence, transcript, pseudogene data | ||||
| Interpolated_map_position | V | 10.1196 | |||||||
| Method | Gene |
