WormBase Tree Display for Gene: WBGene00011813
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| WBGene00011813 | SMap | S_parent | Sequence | T16H12 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 1 | |||||||
| Name | Sequence_name | T16H12.3 | |||||||
| Molecular_name | T16H12.3a | ||||||||
| T16H12.3a.1 | |||||||||
| CE50317 | |||||||||
| T16H12.3b | |||||||||
| CE54154 | |||||||||
| T16H12.3c | |||||||||
| CE50218 | |||||||||
| T16H12.3b.1 | |||||||||
| T16H12.3c.1 | |||||||||
| T16H12.3d | |||||||||
| Other_name | CELE_T16H12.3 | Accession_evidence | NDB | BX284603 | |||||
| Public_name | T16H12.3 | ||||||||
| DB_info | Database | AceView | gene | 3L170 | |||||
| WormQTL | gene | WBGene00011813 | |||||||
| WormFlux | gene | WBGene00011813 | |||||||
| NDB | locus_tag | CELE_T16H12.3 | |||||||
| NCBI | gene | 188560 | |||||||
| RefSeq | protein | NM_001382974.2 | |||||||
| NR_132455.1 | |||||||||
| NM_001379880.2 | |||||||||
| NM_001027591.5 | |||||||||
| SwissProt | UniProtAcc | P34566 | |||||||
| UniProt_GCRP | UniProtAcc | P34566 | |||||||
| RNAcentral | URSid | URS0000861F4F | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 26 May 2004 16:54:53 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of WS125 | ||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Allele (29) | |||||||||
| RNASeq_FPKM (74) | |||||||||
| Contained_in_operon | CEOP3652 | ||||||||
| Ortholog (17) | |||||||||
| Structured_description | Automated_description | Enriched in several structures, including B cell; MSpaaapa; germ line; germline precursor cell; and neurons based on microarray; tiling array; RNA-seq; and single-cell RNA-seq studies. Is affected by several genes including lin-4; lin-14; and sir-2.1 based on microarray and RNA-seq studies. Is affected by seven chemicals including rotenone; D-glucose; and stavudine based on RNA-seq and microarray studies. | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | T16H12.3a | |||||||
| T16H12.3b | |||||||||
| T16H12.3c | |||||||||
| Corresponding_CDS_history | T16H12.3a:wp135 | ||||||||
| T16H12.3a:wp245 | |||||||||
| T16H12.3b:wp245 | |||||||||
| T16H12.3b:wp275 | |||||||||
| Corresponding_transcript | T16H12.3d | ||||||||
| T16H12.3a.1 | |||||||||
| T16H12.3b.1 | |||||||||
| T16H12.3c.1 | |||||||||
| Experimental_info | RNAi_result | WBRNAi00007143 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00018783 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00053435 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00053431 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00006484 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00035623 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr1013097 | ||||||||
| Expr1035203 | |||||||||
| Expr1157007 | |||||||||
| Expr2006224 | |||||||||
| Expr2024442 | |||||||||
| Drives_construct | WBCnstr00030365 | ||||||||
| Construct_product | WBCnstr00030365 | ||||||||
| Microarray_results (23) | |||||||||
| Expression_cluster (77) | |||||||||
| Interaction | WBInteraction000150783 | ||||||||
| WBInteraction000174614 | |||||||||
| WBInteraction000174831 | |||||||||
| WBInteraction000219346 | |||||||||
| WBInteraction000220403 | |||||||||
| WBInteraction000269486 | |||||||||
| WBInteraction000360322 | |||||||||
| WBInteraction000366972 | |||||||||
| WBInteraction000429633 | |||||||||
| Map_info | Positive | Positive_clone | T16H12 | Inferred_automatically | From sequence, transcript, pseudogene data | ||||
| Interpolated_map_position | III | 1.79369 | |||||||
| Method | Gene |
