WormBase Tree Display for Gene: WBGene00011814

WBGene00011814 SMap: S_parent: Sequence: T16H12
  Identity: Version: 2
    Name: CGC_name: gtf-2H2C
      Sequence_name: T16H12.4
      Molecular_name: T16H12.4
        T16H12.4.1
        CE29053
      Other_name: CELE_T16H12.4 Accession_evidence: NDB BX284603
      Public_name: gtf-2H2C
    DB_info: Database: AceView gene 3L178
        WormQTL gene WBGene00011814
        WormFlux gene WBGene00011814
        NDB locus_tag CELE_T16H12.4
        Panther gene CAEEL|WormBase=WBGene00011814|UniProtKB=P34567
          family PTHR12695
        NCBI gene 176421
        RefSeq protein NM_066838.6
        SwissProt UniProtAcc P34567
        TREEFAM TREEFAM_ID TF314037
        UniProt_GCRP UniProtAcc P34567
    Species: Caenorhabditis elegans
    History: Version_change: 1 26 May 2004 16:54:53 WBPerson1971 Event: Imported: Initial conversion from CDS class of WS125
        2 05 Jul 2018 12:31:10 WBPerson1983 Name_change: CGC_name: gtf-2H2C
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: gtf
    Allele (28)
    RNASeq_FPKM (74)
    GO_annotation (13)
    Contained_in_operon: CEOP3652
    Ortholog (38)
    Structured_description: Automated_description: Predicted to enable zinc ion binding activity. Predicted to be involved in nucleotide-excision repair and regulation of transcription by RNA polymerase II. Predicted to be located in nucleus. Predicted to be part of transcription factor TFIIH holo complex. Is an ortholog of human GTF2H2 (general transcription factor IIH subunit 2); GTF2H2C (GTF2H2 family member C); and GTF2H2C_2. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: T16H12.4
    Corresponding_CDS_history: T16H12.4:wp62
    Corresponding_transcript: T16H12.4.1
    Other_sequence (26)
    Associated_feature: WBsf651435
      WBsf667360
      WBsf993902
      WBsf227406
    Transcription_factor: WBTranscriptionFactor000151
      WBTranscriptionFactor000508
  Experimental_info: RNAi_result: WBRNAi00113255 Inferred_automatically: RNAi_primary
      WBRNAi00002630 Inferred_automatically: RNAi_primary
      WBRNAi00053436 Inferred_automatically: RNAi_primary
      WBRNAi00111856 Inferred_automatically: RNAi_primary
      WBRNAi00113025 Inferred_automatically: RNAi_primary
      WBRNAi00009178 Inferred_automatically: RNAi_primary
      WBRNAi00026301 Inferred_automatically: RNAi_primary
      WBRNAi00113122 Inferred_automatically: RNAi_primary
      WBRNAi00116058 Inferred_automatically: RNAi_primary
    Expr_pattern: Expr1024269
      Expr1035204
      Expr1157008
      Expr2006225
      Expr2024443
    Drives_construct: WBCnstr00030364
    Construct_product: WBCnstr00030364
    Microarray_results (17)
    Expression_cluster (78)
    Interaction (111)
  Map_info: Map: III Position: 1.80819
    Positive: Positive_clone: T16H12 Inferred_automatically: From sequence, transcript, pseudogene data
    Pseudo_map_position
  Reference: WBPaper00027309
    WBPaper00038491
    WBPaper00055090
    WBPaper00062203
  Remark: Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. CGC_data_submission
  Method: Gene