WormBase Tree Display for Gene: WBGene00011925
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| WBGene00011925 | SMap | S_parent | Sequence | T22C8 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 1 | |||||||
| Name | Sequence_name | T22C8.4 | |||||||
| Molecular_name | T22C8.4 | ||||||||
| T22C8.4.1 | |||||||||
| CE53808 | |||||||||
| T22C8.4.2 | |||||||||
| Other_name | CELE_T22C8.4 | Accession_evidence | NDB | BX284602 | |||||
| Public_name | T22C8.4 | ||||||||
| DB_info | Database | AceView | gene | 2I914 | |||||
| WormQTL | gene | WBGene00011925 | |||||||
| WormFlux | gene | WBGene00011925 | |||||||
| NDB | locus_tag | CELE_T22C8.4 | |||||||
| NCBI | gene | 188732 | |||||||
| RefSeq | protein | NM_001377832.3 | |||||||
| TrEMBL | UniProtAcc | Q22677 | |||||||
| UniProt_GCRP | UniProtAcc | Q22677 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 26 May 2004 16:54:53 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of WS125 | ||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Allele (28) | |||||||||
| RNASeq_FPKM (74) | |||||||||
| Ortholog (16) | |||||||||
| Paralog | WBGene00011924 | Caenorhabditis elegans | From_analysis | Inparanoid_8 | |||||
| WormBase-Compara | |||||||||
| WBGene00005008 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||||
| WBGene00006827 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||||
| Structured_description | Automated_description | Enriched in several structures, including MSpppaaa; head mesodermal cell; male distal tip cell; rectal epithelial cell; and somatic gonad precursor based on RNA-seq and single-cell RNA-seq studies. Is affected by several genes including skn-1; eat-2; and elt-2 based on microarray; tiling array; and RNA-seq studies. Is affected by fifteen chemicals including mianserin; Alovudine; and stavudine based on RNA-seq and microarray studies. Is predicted to encode a protein with the following domain: Zinc finger C2H2 superfamily. | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | T22C8.4 | |||||||
| Corresponding_CDS_history | T22C8.4:wp121 | ||||||||
| T22C8.4:wp198 | |||||||||
| T22C8.4:wp274 | |||||||||
| Corresponding_transcript | T22C8.4.1 | ||||||||
| T22C8.4.2 | |||||||||
| Associated_feature | WBsf665829 | ||||||||
| WBsf223525 | |||||||||
| Transcription_factor | WBTranscriptionFactor000852 | ||||||||
| Experimental_info | RNAi_result | WBRNAi00053817 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00019014 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00035801 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00019013 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00053816 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr1025726 | ||||||||
| Expr1035263 | |||||||||
| Expr1157364 | |||||||||
| Expr2006360 | |||||||||
| Expr2024580 | |||||||||
| Microarray_results (24) | |||||||||
| Expression_cluster (124) | |||||||||
| Interaction (77) | |||||||||
| Map_info | Positive | Positive_clone | T22C8 | Inferred_automatically | From sequence, transcript, pseudogene data | ||||
| Interpolated_map_position | II | 0.827727 | |||||||
| Method | Gene |
