WormBase Tree Display for Gene: WBGene00011930
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| WBGene00011930 | SMap | S_parent | Sequence | T22G5 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 1 | |||||||
| Name | Sequence_name | T22G5.3 | |||||||
| Molecular_name | T22G5.3 | ||||||||
| T22G5.3.1 | |||||||||
| CE42390 | |||||||||
| Other_name | CELE_T22G5.3 | Accession_evidence | NDB | BX284605 | |||||
| Public_name | T22G5.3 | ||||||||
| DB_info | Database | AceView | gene | 5O363 | |||||
| WormQTL | gene | WBGene00011930 | |||||||
| WormFlux | gene | WBGene00011930 | |||||||
| NDB | locus_tag | CELE_T22G5.3 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00011930|UniProtKB=Q9XVI8 | |||||||
| family | PTHR21503 | ||||||||
| NCBI | gene | 179883 | |||||||
| RefSeq | protein | NM_074040.4 | |||||||
| TREEFAM | TREEFAM_ID | TF352364 | |||||||
| TrEMBL | UniProtAcc | Q9XVI8 | |||||||
| UniProt_GCRP | UniProtAcc | Q9XVI8 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 26 May 2004 16:54:53 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of WS125 | ||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Allele (48) | |||||||||
| RNASeq_FPKM (74) | |||||||||
| Ortholog (24) | |||||||||
| Paralog (57) | |||||||||
| Structured_description | Concise_description | This gene encodes a protein containing an F-box, a motif predicted to mediate protein-protein interactions either with homologs of yeast Skp-1p or with other proteins. | Paper_evidence | WBPaper00012854 | |||||
| Curator_confirmed | WBPerson567 | ||||||||
| Date_last_updated | 17 Jun 2004 00:00:00 | ||||||||
| Automated_description | Enriched in several structures, including AVJ; FLP; MSpaaapa; body wall muscle cell; and intestine based on tiling array; microarray; RNA-seq; and single-cell RNA-seq studies. Is affected by several genes including daf-2; skn-1; and hsf-1 based on microarray and RNA-seq studies. Is affected by seven chemicals including stavudine; Zidovudine; and antimycin based on RNA-seq and microarray studies. Is predicted to encode a protein with the following domains: F-box associated and F-box associated domain, type 2. | Paper_evidence | WBPaper00065943 | ||||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | T22G5.3 | |||||||
| Corresponding_CDS_history | T22G5.3:wp61 | ||||||||
| T22G5.3:wp188 | |||||||||
| Corresponding_transcript | T22G5.3.1 | ||||||||
| Associated_feature | WBsf647493 | ||||||||
| WBsf655075 | |||||||||
| WBsf661036 | |||||||||
| WBsf232841 | |||||||||
| Experimental_info | RNAi_result | WBRNAi00053856 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00019042 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr1022020 | ||||||||
| Expr1035264 | |||||||||
| Expr1157407 | |||||||||
| Expr2006382 | |||||||||
| Expr2024602 | |||||||||
| Microarray_results (21) | |||||||||
| Expression_cluster (79) | |||||||||
| Map_info | Positive | Positive_clone | T22G5 | Inferred_automatically | From sequence, transcript, pseudogene data | ||||
| Interpolated_map_position | V | 5.7065 | |||||||
| Reference | WBPaper00012854 | ||||||||
| Method | Gene |
