WormBase Tree Display for Gene: WBGene00011961
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WBGene00011961 | SMap | S_parent | Sequence | T23G4 | |||||
---|---|---|---|---|---|---|---|---|---|
Identity | Version | 2 | |||||||
Name | CGC_name | srlf-26 | Person_evidence | WBPerson260 | |||||
Laboratory_evidence | OH | ||||||||
Sequence_name | T23G4.5 | ||||||||
Molecular_name | T23G4.5 | ||||||||
T23G4.5.1 | |||||||||
CE16457 | |||||||||
Other_name | T23G4.5 | ||||||||
CELE_T23G4.5 | Accession_evidence | NDB | BX284604 | ||||||
Public_name | srlf-26 | ||||||||
DB_info | Database | AceView | gene | 4O443 | |||||
WormQTL | gene | WBGene00011961 | |||||||
WormFlux | gene | WBGene00011961 | |||||||
NDB | locus_tag | CELE_T23G4.5 | |||||||
Panther | gene | CAEEL|WormBase=WBGene00011961|UniProtKB=O18128 | |||||||
family | PTHR21593 | ||||||||
NCBI | gene | 188815 | |||||||
RefSeq | protein | NM_070243.2 | |||||||
TREEFAM | TREEFAM_ID | TF316074 | |||||||
TrEMBL | UniProtAcc | O18128 | |||||||
UniProt_GCRP | UniProtAcc | O18128 | |||||||
Species | Caenorhabditis elegans | ||||||||
History | Version_change | 1 | 26 May 2004 16:54:53 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of WS125 | ||
2 | 03 Oct 2022 15:59:20 | WBPerson21950 | Name_change | CGC_name | srlf-26 | ||||
Other_name | T23G4.5 | ||||||||
Status | Live | ||||||||
Gene_info | Biotype | SO:0001217 | |||||||
Gene_class | srlf | ||||||||
Allele (32) | |||||||||
RNASeq_FPKM (74) | |||||||||
Ortholog (18) | |||||||||
Paralog (39) | |||||||||
Structured_description | Automated_description | Enriched in I5 neuron; body wall muscle cell; coelomocyte; germline precursor cell; and in male based on tiling array; RNA-seq; and single-cell RNA-seq studies. Is affected by several genes including let-60; rrf-3; and tph-1 based on microarray and RNA-seq studies. Is affected by six chemicals including Alovudine; stavudine; and Zidovudine based on RNA-seq and microarray studies. Is predicted to encode a protein with the following domains: SXP/RAL-2 family protein Ani s 5-like, metal-binding domain and SXP/RAL-2 family protein Ani s 5-like, cation-binding domain. | Paper_evidence | WBPaper00065943 | |||||
Curator_confirmed | WBPerson324 | ||||||||
WBPerson37462 | |||||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
Molecular_info | Corresponding_CDS | T23G4.5 | |||||||
Corresponding_transcript | T23G4.5.1 | ||||||||
Associated_feature | WBsf229450 | ||||||||
Experimental_info | RNAi_result | WBRNAi00035887 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00019103 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00053974 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00112662 | Inferred_automatically | RNAi_primary | |||||||
Expr_pattern | Expr1016941 | ||||||||
Expr1157520 | |||||||||
Expr2006424 | |||||||||
Expr2024644 | |||||||||
Drives_construct | WBCnstr00030248 | ||||||||
Construct_product | WBCnstr00030248 | ||||||||
Microarray_results (18) | |||||||||
Expression_cluster (41) | |||||||||
Interaction | WBInteraction000548540 | ||||||||
Map_info | Positive | Positive_clone | T23G4 | Inferred_automatically | From sequence, transcript, pseudogene data | ||||
Interpolated_map_position | IV | 10.5597 | |||||||
Method | Gene |