WormBase Tree Display for Gene: WBGene00012021
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| WBGene00012021 | SMap | S_parent | Sequence | T25E12 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 1 | |||||||
| Name | Sequence_name | T25E12.6 | |||||||
| Molecular_name | T25E12.6 | ||||||||
| T25E12.6.1 | |||||||||
| CE16467 | |||||||||
| Other_name | CELE_T25E12.6 | Accession_evidence | NDB | BX284605 | |||||
| Public_name | T25E12.6 | ||||||||
| DB_info | Database | AceView | gene | 5R223 | |||||
| WormQTL | gene | WBGene00012021 | |||||||
| WormFlux | gene | WBGene00012021 | |||||||
| NDB | locus_tag | CELE_T25E12.6 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00012021|UniProtKB=O45820 | |||||||
| family | PTHR23015 | ||||||||
| NCBI | gene | 180118 | |||||||
| RefSeq | protein | NM_074836.4 | |||||||
| TREEFAM | TREEFAM_ID | TF321294 | |||||||
| TrEMBL | UniProtAcc | O45820 | |||||||
| UniProt_GCRP | UniProtAcc | O45820 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 26 May 2004 16:54:53 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of WS125 | ||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Allele (150) | |||||||||
| RNASeq_FPKM (74) | |||||||||
| Ortholog | WBGene00042290 | Caenorhabditis briggsae | From_analysis | OrthoMCL | |||||
| WBGene00061145 | Caenorhabditis remanei | From_analysis | TreeFam | ||||||
| WBGene00082006 | Caenorhabditis remanei | From_analysis | TreeFam | ||||||
| chrV_pilon.g17255 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||||
| Paralog (212) | |||||||||
| Structured_description | Automated_description | Enriched in several structures, including ABalaapppa; ABalapaaaa; body wall muscle cell; ciliated neurons; and germ line based on tiling array; RNA-seq; and single-cell RNA-seq studies. Is affected by several genes including daf-16; daf-2; and dpy-10 based on microarray and RNA-seq studies. Is affected by fourteen chemicals including methylmercuric chloride; mianserin; and stavudine based on microarray and RNA-seq studies. Is predicted to encode a protein with the following domains: Domain of unknown function DUF38/FTH, Caenorhabditis species; FTH domain; and F-box A protein FB224. | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | T25E12.6 | |||||||
| Corresponding_transcript | T25E12.6.1 | ||||||||
| Associated_feature | WBsf647641 | ||||||||
| WBsf1002507 | |||||||||
| WBsf233126 | |||||||||
| Experimental_info | RNAi_result | WBRNAi00019217 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00054137 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00035963 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr1016408 | ||||||||
| Expr1035317 | |||||||||
| Expr1157684 | |||||||||
| Expr2006503 | |||||||||
| Expr2024722 | |||||||||
| Drives_construct | WBCnstr00030195 | ||||||||
| Construct_product | WBCnstr00030195 | ||||||||
| Microarray_results (16) | |||||||||
| Expression_cluster (181) | |||||||||
| Interaction (212) | |||||||||
| Map_info | Positive | Positive_clone | T25E12 | Inferred_automatically | From sequence, transcript, pseudogene data | ||||
| Interpolated_map_position | V | 11.1547 | |||||||
| Method | Gene |
