WormBase Tree Display for Gene: WBGene00012025
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| WBGene00012025 | SMap | S_parent | Sequence | T25E12 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 2 | |||||||
| Name | CGC_name | clec-38 | Person_evidence | WBPerson655 | |||||
| Sequence_name | T25E12.10 | ||||||||
| Molecular_name | T25E12.10 | ||||||||
| T25E12.10.1 | |||||||||
| CE47844 | |||||||||
| Other_name | CELE_T25E12.10 | Accession_evidence | NDB | BX284605 | |||||
| Public_name | clec-38 | ||||||||
| DB_info | Database | AceView | gene | 5R214 | |||||
| WormQTL | gene | WBGene00012025 | |||||||
| WormFlux | gene | WBGene00012025 | |||||||
| NDB | locus_tag | CELE_T25E12.10 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00012025|UniProtKB=O45824 | |||||||
| family | PTHR22991 | ||||||||
| NCBI | gene | 188900 | |||||||
| RefSeq | protein | NM_074832.4 | |||||||
| SwissProt | UniProtAcc | O45824 | |||||||
| TREEFAM | TREEFAM_ID | TF351663 | |||||||
| UniProt_GCRP | UniProtAcc | O45824 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 26 May 2004 16:54:53 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of WS125 | ||
| 2 | 29 Apr 2005 13:53:46 | WBPerson2970 | Name_change | CGC_name | clec-38 | ||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | clec | ||||||||
| Cloned_by | Person_evidence | WBPerson2555 | |||||||
| Allele (146) | |||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation (28) | |||||||||
| Ortholog (36) | |||||||||
| Paralog (52) | |||||||||
| Structured_description | Automated_description | Predicted to enable carbohydrate binding activity. Involved in several processes, including axon guidance; presynapse assembly; and regulation of neuron projection development. Predicted to be located in membrane. Expressed in PLML; PLMR; head neurons; intestine; and ventral cord neurons. | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | T25E12.10 | |||||||
| Corresponding_transcript | T25E12.10.1 | ||||||||
| Associated_feature | WBsf653493 | ||||||||
| Experimental_info | RNAi_result | WBRNAi00019213 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00054133 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00077709 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr8122 | ||||||||
| Expr1024103 | |||||||||
| Expr1157676 | |||||||||
| Expr2010170 | |||||||||
| Expr2028412 | |||||||||
| Drives_construct | WBCnstr00013127 | ||||||||
| WBCnstr00030191 | |||||||||
| Construct_product | WBCnstr00030191 | ||||||||
| Microarray_results (12) | |||||||||
| Expression_cluster (51) | |||||||||
| Interaction (27) | |||||||||
| Map_info | Map | V | Position | 11.1338 | Error | 0.004506 | |||
| Positive | Positive_clone | T25E12 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Mapping_data | Multi_point | 5496 | |||||||
| 4616 | |||||||||
| Pseudo_map_position | |||||||||
| Reference | WBPaper00026240 | ||||||||
| WBPaper00028176 | |||||||||
| WBPaper00028182 | |||||||||
| WBPaper00030297 | |||||||||
| WBPaper00030315 | |||||||||
| WBPaper00030316 | |||||||||
| WBPaper00031828 | |||||||||
| WBPaper00035146 | |||||||||
| WBPaper00038491 | |||||||||
| WBPaper00055090 | |||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
