WormBase Tree Display for Gene: WBGene00012067

WBGene00012067 SMap: S_parent: Sequence: T26H2
  Identity: Version: 2
    Name: CGC_name: sqst-3 Paper_evidence: WBPaper00042170
          Person_evidence: WBPerson716
      Sequence_name: T26H2.5
      Molecular_name: T26H2.5
        T26H2.5.1
        CE16491
      Other_name: CELE_T26H2.5 Accession_evidence: NDB BX284605
      Public_name: sqst-3
    DB_info: Database: AceView gene 5T703
        WormQTL gene WBGene00012067
        WormFlux gene WBGene00012067
        NDB locus_tag CELE_T26H2.5
        Panther gene CAEEL|WormBase=WBGene00012067|UniProtKB=O18138
          family PTHR15090
        NCBI gene 188950
        RefSeq protein NM_075337.3
        TREEFAM TREEFAM_ID TF317066
        TrEMBL UniProtAcc O18138
        UniProt_GCRP UniProtAcc O18138
    Species: Caenorhabditis elegans
    History: Version_change: 1 26 May 2004 16:54:53 WBPerson1971 Event: Imported: Initial conversion from CDS class of WS125
        2 05 Apr 2013 16:46:51 WBPerson2970 Name_change: CGC_name: sqst-3
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: sqst
    Allele (47)
    RNASeq_FPKM (74)
    GO_annotation: 00031423
      00031424
      00031425
      00031426
      00031427
      00031428
      00031429
      00031430
      00119258
    Ortholog (21)
    Paralog: WBGene00011737 Caenorhabditis elegans From_analysis: Panther
            WormBase-Compara
      WBGene00012516 Caenorhabditis elegans From_analysis: TreeFam
            Panther
            WormBase-Compara
      WBGene00015552 Caenorhabditis elegans From_analysis: Panther
            WormBase-Compara
      WBGene00021495 Caenorhabditis elegans From_analysis: Panther
            WormBase-Compara
    Structured_description: Automated_description: Predicted to enable K63-linked polyubiquitin modification-dependent protein binding activity and protein kinase C binding activity. Predicted to be involved in aggrephagy; endosome organization; and mitophagy. Predicted to be located in aggresome and amphisome. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: T26H2.5
    Corresponding_transcript: T26H2.5.1
    Other_sequence: JI229483.1
  Experimental_info: RNAi_result: WBRNAi00054231 Inferred_automatically: RNAi_primary
      WBRNAi00070132 Inferred_automatically: RNAi_primary
      WBRNAi00019279 Inferred_automatically: RNAi_primary
    Expr_pattern: Expr1028948
      Expr1035332
      Expr1157779
      Expr2016113
      Expr2034348
    Drives_construct: WBCnstr00030157
    Construct_product: WBCnstr00030157
    Microarray_results (18)
    Expression_cluster (46)
    Interaction: WBInteraction000189380
      WBInteraction000221501
      WBInteraction000360359
      WBInteraction000435224
  Map_info: Map: V Position: 20.4557
    Positive: Positive_clone: T26H2 Inferred_automatically: From sequence, transcript, pseudogene data
    Pseudo_map_position
  Reference: WBPaper00030811
    WBPaper00056693
    WBPaper00058118
    WBPaper00060613
  Remark: Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. CGC_data_submission
  Method: Gene