WormBase Tree Display for Gene: WBGene00012095
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| WBGene00012095 | SMap | S_parent | Sequence | T27E9 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 2 | |||||||
| Name | CGC_name | pssy-2 | Person_evidence | WBPerson1105 | |||||
| Sequence_name | T27E9.5 | ||||||||
| Molecular_name | T27E9.5 | ||||||||
| T27E9.5.1 | |||||||||
| CE52933 | |||||||||
| Other_name | CELE_T27E9.5 | Accession_evidence | NDB | BX284603 | |||||
| Public_name | pssy-2 | ||||||||
| DB_info | Database (13) | ||||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 26 May 2004 16:54:53 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of WS125 | ||
| 2 | 02 Mar 2006 11:42:04 | WBPerson2970 | Name_change | CGC_name | pssy-2 | ||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | pssy | ||||||||
| Allele (61) | |||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation (15) | |||||||||
| Ortholog (35) | |||||||||
| Paralog | WBGene00013920 | Caenorhabditis elegans | From_analysis | Panther | |||||
| WormBase-Compara | |||||||||
| WBGene00012897 | Caenorhabditis elegans | From_analysis | Panther | ||||||
| Structured_description | Automated_description | Predicted to enable L-serine-phosphatidylethanolamine phosphatidyltransferase activity. Predicted to be involved in phosphatidylserine biosynthetic process. Predicted to be located in endoplasmic reticulum membrane. Human ortholog(s) of this gene implicated in Lenz-Majewski hyperostotic dwarfism. Is an ortholog of human PTDSS1 (phosphatidylserine synthase 1). | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Disease_info | Potential_model | DOID:0111507 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:9587) | ||||
| Molecular_info | Corresponding_CDS | T27E9.5 | |||||||
| Corresponding_CDS_history | T27E9.5:wp179 | ||||||||
| T27E9.5:wp268 | |||||||||
| Corresponding_transcript | T27E9.5.1 | ||||||||
| Other_sequence | Tcir_isotig32467 | ||||||||
| MCC00076_1 | |||||||||
| CRC11637_1 | |||||||||
| MA01632 | |||||||||
| CR07242 | |||||||||
| CRC00632_1 | |||||||||
| CJC12060_1 | |||||||||
| Associated_feature | WBsf658501 | ||||||||
| WBsf658540 | |||||||||
| WBsf659743 | |||||||||
| WBsf994899 | |||||||||
| WBsf994900 | |||||||||
| WBsf994901 | |||||||||
| WBsf1016374 | |||||||||
| WBsf226027 | |||||||||
| Experimental_info | RNAi_result | WBRNAi00054328 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00019346 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00006040 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr1022183 | ||||||||
| Expr1035338 | |||||||||
| Expr1157875 | |||||||||
| Expr2015138 | |||||||||
| Expr2033376 | |||||||||
| Drives_construct | WBCnstr00030138 | ||||||||
| Construct_product | WBCnstr00030138 | ||||||||
| Microarray_results (20) | |||||||||
| Expression_cluster (114) | |||||||||
| Interaction (14) | |||||||||
| Map_info | Map | III | Position | 21.2258 | Error | 0.00247 | |||
| Positive | Positive_clone | T27E9 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Pseudo_map_position | |||||||||
| Reference | WBPaper00038491 | ||||||||
| WBPaper00040189 | |||||||||
| WBPaper00042257 | |||||||||
| WBPaper00055090 | |||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
