WormBase Tree Display for Gene: WBGene00012162
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| WBGene00012162 | SMap | S_parent | Sequence | VZC374L | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 2 | |||||||
| Name | CGC_name | sek-6 | Person_evidence | WBPerson1315 | |||||
| WBPerson1636 | |||||||||
| Sequence_name | VZC374L.1 | ||||||||
| Molecular_name | VZC374L.1a | ||||||||
| VZC374L.1a.1 | |||||||||
| CE16527 | |||||||||
| VZC374L.1b | |||||||||
| CE54354 | |||||||||
| VZC374L.1b.1 | |||||||||
| Other_name | CELE_VZC374L.1 | Accession_evidence | NDB | BX284606 | |||||
| Public_name | sek-6 | ||||||||
| DB_info | Database (12) | ||||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 26 May 2004 16:54:53 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of WS125 | ||
| 2 | 04 Jul 2013 10:29:57 | WBPerson2970 | Name_change | CGC_name | sek-6 | ||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | sek | ||||||||
| Allele (39) | |||||||||
| Strain | WBStrain00002555 | ||||||||
| WBStrain00031986 | |||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation (12) | |||||||||
| Ortholog (29) | |||||||||
| Paralog (25) | |||||||||
| Structured_description | Automated_description | Predicted to enable JUN kinase kinase activity. Predicted to be involved in MAPK cascade. Human ortholog(s) of this gene implicated in several diseases, including carcinoma (multiple); invasive ductal carcinoma; and prostate carcinoma in situ. Is an ortholog of human MAP2K4 (mitogen-activated protein kinase kinase 4). | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Disease_info | Potential_model (14) | ||||||||
| Molecular_info | Corresponding_CDS | VZC374L.1a | |||||||
| VZC374L.1b | |||||||||
| Corresponding_transcript | VZC374L.1a.1 | ||||||||
| VZC374L.1b.1 | |||||||||
| Other_sequence (17) | |||||||||
| Associated_feature | WBsf648440 | ||||||||
| Experimental_info | RNAi_result | WBRNAi00092990 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00075991 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00036125 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00054479 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00094907 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00019440 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00112967 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00113197 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Chronogram1534 | ||||||||
| Expr1018322 | |||||||||
| Expr1158027 | |||||||||
| Expr2015727 | |||||||||
| Expr2033960 | |||||||||
| Drives_construct | WBCnstr00003122 | ||||||||
| WBCnstr00030100 | |||||||||
| Construct_product | WBCnstr00030100 | ||||||||
| Microarray_results (18) | |||||||||
| Expression_cluster (89) | |||||||||
| Interaction (16) | |||||||||
| Map_info | Map | X | Position | 1.73441 | |||||
| Positive | Positive_clone | VZC374L | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Pseudo_map_position | |||||||||
| Reference | WBPaper00024295 | ||||||||
| WBPaper00027258 | |||||||||
| WBPaper00038491 | |||||||||
| WBPaper00055090 | |||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
