WormBase Tree Display for Gene: WBGene00012246
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| WBGene00012246 | SMap | S_parent | Sequence | W04E12 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 2 | |||||||
| Name | CGC_name | fbxa-131 | Person_evidence | WBPerson655 | |||||
| Sequence_name | W04E12.1 | ||||||||
| Molecular_name | W04E12.1 | ||||||||
| W04E12.1.1 | |||||||||
| CE18996 | |||||||||
| Other_name | CELE_W04E12.1 | Accession_evidence | NDB | BX284605 | |||||
| Public_name | fbxa-131 | ||||||||
| DB_info | Database | AceView | gene | 5U209 | |||||
| WormQTL | gene | WBGene00012246 | |||||||
| WormFlux | gene | WBGene00012246 | |||||||
| NDB | locus_tag | CELE_W04E12.1 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00012246|UniProtKB=Q9XUL5 | |||||||
| family | PTHR23015 | ||||||||
| NCBI | gene | 189188 | |||||||
| RefSeq | protein | NM_075423.1 | |||||||
| TREEFAM | TREEFAM_ID | TF322006 | |||||||
| TrEMBL | UniProtAcc | Q9XUL5 | |||||||
| UniProt_GCRP | UniProtAcc | Q9XUL5 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 26 May 2004 16:54:53 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of WS125 | ||
| 2 | 12 Dec 2005 15:18:56 | WBPerson2970 | Name_change | CGC_name | fbxa-131 | ||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | fbxa | ||||||||
| Allele (43) | |||||||||
| RNASeq_FPKM (74) | |||||||||
| Ortholog | chrIV_pilon.g9950 | Caenorhabditis elegans | From_analysis | WormBase-Compara | |||||
| Paralog (216) | |||||||||
| Structured_description | Automated_description | Is affected by drh-3 and mdt-15 based on RNA-seq and microarray studies. Is affected by allantoin based on microarray studies. Is predicted to encode a protein with the following domains: Domain of unknown function DUF38/FTH, Caenorhabditis species and FTH domain. | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | W04E12.1 | |||||||
| Corresponding_transcript | W04E12.1.1 | ||||||||
| Experimental_info | RNAi_result | WBRNAi00036273 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00054772 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00019592 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr1021257 | ||||||||
| Expr1158308 | |||||||||
| Expr2029707 | |||||||||
| Microarray_results (14) | |||||||||
| Expression_cluster (19) | |||||||||
| Interaction (76) | |||||||||
| Map_info | Map | V | Position | 23.0986 | Error | 0.0445 | |||
| Positive | Positive_clone | W04E12 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Pseudo_map_position | |||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
