WormBase Tree Display for Gene: WBGene00012253
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WBGene00012253 | SMap | S_parent | Sequence | W04E12 | |||||
---|---|---|---|---|---|---|---|---|---|
Identity | Version | 2 | |||||||
Name | CGC_name | clec-50 | Person_evidence | WBPerson655 | |||||
Sequence_name | W04E12.8 | ||||||||
Molecular_name | W04E12.8 | ||||||||
W04E12.8.1 | |||||||||
CE19003 | |||||||||
Other_name | CELE_W04E12.8 | Accession_evidence | NDB | BX284605 | |||||
Public_name | clec-50 | ||||||||
DB_info | Database | AceView | gene | 5U222 | |||||
WormQTL | gene | WBGene00012253 | |||||||
WormFlux | gene | WBGene00012253 | |||||||
NDB | locus_tag | CELE_W04E12.8 | |||||||
Panther | gene | CAEEL|WormBase=WBGene00012253|UniProtKB=Q9XUL7 | |||||||
family | PTHR22803 | ||||||||
NCBI | gene | 180299 | |||||||
RefSeq | protein | NM_075429.8 | |||||||
TrEMBL | UniProtAcc | Q9XUL7 | |||||||
UniProt_GCRP | UniProtAcc | Q9XUL7 | |||||||
Species | Caenorhabditis elegans | ||||||||
History | Version_change | 1 | 26 May 2004 16:54:53 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of WS125 | ||
2 | 29 Apr 2005 13:53:46 | WBPerson2970 | Name_change | CGC_name | clec-50 | ||||
Status | Live | ||||||||
Gene_info | Biotype | SO:0001217 | |||||||
Gene_class | clec | ||||||||
Allele (123) | |||||||||
Strain | WBStrain00032582 | ||||||||
WBStrain00032583 | |||||||||
WBStrain00004718 | |||||||||
RNASeq_FPKM (74) | |||||||||
GO_annotation | 00101869 | ||||||||
Ortholog (62) | |||||||||
Paralog (13) | |||||||||
Structured_description | Automated_description | Predicted to enable signaling receptor activity. Expressed in intestine. | Paper_evidence | WBPaper00065943 | |||||
Curator_confirmed | WBPerson324 | ||||||||
WBPerson37462 | |||||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
Molecular_info | Corresponding_CDS | W04E12.8 | |||||||
Corresponding_transcript | W04E12.8.1 | ||||||||
Other_sequence (26) | |||||||||
Associated_feature | WBsf653588 | ||||||||
WBsf669870 | |||||||||
WBsf1003353 | |||||||||
Experimental_info | RNAi_result | WBRNAi00054779 | Inferred_automatically | RNAi_primary | |||||
Expr_pattern | Expr1971 | ||||||||
Expr1027173 | |||||||||
Expr1158315 | |||||||||
Expr2010183 | |||||||||
Expr2028425 | |||||||||
Microarray_results (17) | |||||||||
Expression_cluster (249) | |||||||||
Interaction | WBInteraction000032334 | ||||||||
WBInteraction000119053 | |||||||||
WBInteraction000119055 | |||||||||
WBInteraction000122776 | |||||||||
WBInteraction000122782 | |||||||||
WBInteraction000122816 | |||||||||
WBInteraction000123376 | |||||||||
WBInteraction000542657 | |||||||||
WBInteraction000546302 | |||||||||
Map_info | Map | V | Position | 23.2658 | Error | 0.031235 | |||
Positive | Positive_clone | W04E12 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
Pseudo_map_position | |||||||||
Reference | WBPaper00005382 | ||||||||
WBPaper00031686 | |||||||||
WBPaper00032258 | |||||||||
WBPaper00037541 | |||||||||
WBPaper00038491 | |||||||||
WBPaper00039111 | |||||||||
WBPaper00055090 | |||||||||
WBPaper00058665 | |||||||||
WBPaper00064841 | |||||||||
Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
Method | Gene |