WormBase Tree Display for Gene: WBGene00012343
expand all nodes | collapse all nodes | view schema
| WBGene00012343 | SMap | S_parent | Sequence | CHROMOSOME_I | ||
|---|---|---|---|---|---|---|
| Identity (6) | ||||||
| Gene_info | Biotype | SO:0001217 | ||||
| Gene_class | casc | |||||
| Allele (50) | ||||||
| RNASeq_FPKM (74) | ||||||
| GO_annotation (17) | ||||||
| Ortholog (25) | ||||||
| Structured_description | Automated_description | Predicted to enable mRNA binding activity. Predicted to be involved in RNA metabolic process; mRNA transport; and regulation of translation. Predicted to be located in cell projection; nuclear speck; and perinuclear region of cytoplasm. Predicted to be part of exon-exon junction complex. Expressed widely. Is an ortholog of human CASC3 (CASC3 exon junction complex subunit). | Paper_evidence | WBPaper00065943 | ||
| Curator_confirmed | WBPerson324 | |||||
| WBPerson37462 | ||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | |||||
| Date_last_updated | 29 Nov 2023 00:00:00 | |||||
| Molecular_info | Corresponding_CDS | W08E3.2 | ||||
| Corresponding_CDS_history | W08E3.2:wp20 | |||||
| Corresponding_transcript | W08E3.2.1 | |||||
| Other_sequence (17) | ||||||
| Associated_feature | WBsf220495 | |||||
| WBsf220496 | ||||||
| WBsf220497 | ||||||
| Experimental_info | RNAi_result | WBRNAi00035141 | Inferred_automatically | RNAi_primary | ||
| WBRNAi00054991 | Inferred_automatically | RNAi_primary | ||||
| WBRNAi00116992 | Inferred_automatically | RNAi_primary | ||||
| WBRNAi00000338 | Inferred_automatically | RNAi_primary | ||||
| WBRNAi00054992 | Inferred_automatically | RNAi_primary | ||||
| WBRNAi00004128 | Inferred_automatically | RNAi_primary | ||||
| WBRNAi00019724 | Inferred_automatically | RNAi_primary | ||||
| Expr_pattern | Expr2053 | |||||
| Expr1014722 | ||||||
| Expr1035463 | ||||||
| Expr1158524 | ||||||
| Expr2006860 | ||||||
| Expr2025085 | ||||||
| Drives_construct | WBCnstr00029986 | |||||
| Construct_product | WBCnstr00029986 | |||||
| Microarray_results (20) | ||||||
| Expression_cluster (112) | ||||||
| Interaction (53) | ||||||
| Map_info | Positive | Positive_clone | W08E3 | Inferred_automatically | From sequence, transcript, pseudogene data | |
| Interpolated_map_position | I | 18.0459 | ||||
| Reference | WBPaper00038491 | |||||
| WBPaper00055090 | ||||||
| WBPaper00064339 | ||||||
| Method | Gene |
