WormBase Tree Display for Gene: WBGene00012390
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| WBGene00012390 | SMap | S_parent | Sequence | Y6B3B | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 2 | |||||||
| Name | CGC_name | gpap-1 | Person_evidence | WBPerson25803 | |||||
| Sequence_name | Y6B3B.5 | ||||||||
| Molecular_name | Y6B3B.5a | ||||||||
| Y6B3B.5a.1 | |||||||||
| CE37581 | |||||||||
| Y6B3B.5b | |||||||||
| CE37582 | |||||||||
| Y6B3B.5a.2 | |||||||||
| Y6B3B.5b.1 | |||||||||
| Other_name | CELE_Y6B3B.5 | Accession_evidence | NDB | BX284601 | |||||
| Public_name | gpap-1 | ||||||||
| DB_info | Database (13) | ||||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 26 May 2004 16:54:53 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of WS125 | ||
| 2 | 13 Jul 2016 14:54:16 | WBPerson2970 | Name_change | CGC_name | gpap-1 | ||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | gpap | ||||||||
| Allele (91) | |||||||||
| Strain | WBStrain00032802 | ||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation | 00081515 | ||||||||
| 00081516 | |||||||||
| 00081517 | |||||||||
| 00081518 | |||||||||
| Contained_in_operon | CEOP1716 | ||||||||
| Ortholog (37) | |||||||||
| Paralog | WBGene00044063 | Caenorhabditis elegans | From_analysis | TreeFam | |||||
| Panther | |||||||||
| WormBase-Compara | |||||||||
| WBGene00008765 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||||
| Structured_description | Automated_description | Predicted to enable 3'-nucleotidase activity. Predicted to be located in endomembrane system. Human ortholog(s) of this gene implicated in chondrodysplasia with joint dislocations gPAPP type. Is an ortholog of human BPNT2 (3'(2'), 5'-bisphosphate nucleotidase 2). | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Disease_info | Potential_model | DOID:0112224 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:26019) | ||||
| Molecular_info | Corresponding_CDS | Y6B3B.5a | |||||||
| Y6B3B.5b | |||||||||
| Corresponding_CDS_history | Y6B3B.5:wp101 | ||||||||
| Y6B3B.5:wp132 | |||||||||
| Corresponding_transcript | Y6B3B.5a.1 | ||||||||
| Y6B3B.5a.2 | |||||||||
| Y6B3B.5b.1 | |||||||||
| Other_sequence (376) | |||||||||
| Associated_feature | WBsf649717 | ||||||||
| WBsf649718 | |||||||||
| WBsf985937 | |||||||||
| WBsf220539 | |||||||||
| Experimental_info | RNAi_result | WBRNAi00037744 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00103625 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00116462 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00004783 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00058093 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr1028400 | ||||||||
| Expr1035491 | |||||||||
| Expr1161506 | |||||||||
| Expr2012198 | |||||||||
| Expr2030434 | |||||||||
| Microarray_results (22) | |||||||||
| Expression_cluster (43) | |||||||||
| Interaction (18) | |||||||||
| Map_info | Map | I | Position | 21.6561 | |||||
| Positive | Positive_clone | Y6B3B | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Pseudo_map_position | |||||||||
| Reference | WBPaper00035539 | ||||||||
| WBPaper00038491 | |||||||||
| WBPaper00049793 | |||||||||
| WBPaper00055090 | |||||||||
| WBPaper00064339 | |||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
