WormBase Tree Display for Gene: WBGene00012437
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| WBGene00012437 | SMap | S_parent | Sequence | Y11D7A | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 3 | |||||||
| Name | CGC_name | nmy-3 | Person_evidence | WBPerson658 | |||||
| Sequence_name | Y11D7A.14 | ||||||||
| Molecular_name | Y11D7A.14 | ||||||||
| Y11D7A.14.1 | |||||||||
| CE32957 | |||||||||
| Other_name | hum-9 | ||||||||
| CELE_Y11D7A.14 | Accession_evidence | NDB | BX284604 | ||||||
| Public_name | nmy-3 | ||||||||
| DB_info | Database | AceView | gene | 4K47 | |||||
| WormQTL | gene | WBGene00012437 | |||||||
| WormFlux | gene | WBGene00012437 | |||||||
| NDB | locus_tag | CELE_Y11D7A.14 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00012437|UniProtKB=Q9XWR0 | |||||||
| family | PTHR45615 | ||||||||
| NCBI | gene | 177750 | |||||||
| RefSeq | protein | NM_069219.7 | |||||||
| TrEMBL | UniProtAcc | Q9XWR0 | |||||||
| UniProt_GCRP | UniProtAcc | Q9XWR0 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 26 May 2004 16:54:53 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of WS125 | ||
| 2 | 17 Feb 2012 16:57:01 | WBPerson2970 | Name_change | CGC_name | hum-9 | ||||
| 3 | 07 Dec 2017 13:24:47 | WBPerson1983 | Name_change | CGC_name | nmy-3 | ||||
| Other_name | hum-9 | ||||||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | nmy | ||||||||
| Allele (96) | |||||||||
| Strain | WBStrain00052099 | ||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation (16) | |||||||||
| Ortholog (48) | |||||||||
| Paralog (21) | |||||||||
| Structured_description | Concise_description | Y11D7A.14 encodes a putative myosin, with an N-terminal myosin headmotor domain and a C-terminal coiled-coil domain; Y11D7A.14 has noobvious function in mass RNAi assays. | Paper_evidence | WBPaper00031504 | |||||
| Curator_confirmed | WBPerson567 | ||||||||
| Date_last_updated | 16 Mar 2008 00:00:00 | ||||||||
| Automated_description | Predicted to enable actin filament binding activity and microfilament motor activity. Predicted to be involved in muscle contraction and sarcomere organization. Predicted to be located in cytoplasm and myosin filament. Predicted to be part of myosin II complex. | Paper_evidence | WBPaper00065943 | ||||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | Y11D7A.14 | |||||||
| Corresponding_CDS_history | Y11D7A.14:wp92 | ||||||||
| Corresponding_transcript | Y11D7A.14.1 | ||||||||
| Other_sequence | Oden_isotig14303 | ||||||||
| Dviv_isotig25990 | |||||||||
| FD515158.1 | |||||||||
| EV852876.1 | |||||||||
| DVC00353_1 | |||||||||
| JI166170.1 | |||||||||
| CSC00597_1 | |||||||||
| Oden_isotig28390 | |||||||||
| EV853555.1 | |||||||||
| Oden_isotig14302 | |||||||||
| Associated_feature | WBsf646222 | ||||||||
| WBsf646223 | |||||||||
| WBsf660502 | |||||||||
| WBsf228807 | |||||||||
| Experimental_info | RNAi_result | WBRNAi00020047 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00055535 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr1028433 | ||||||||
| Expr1035506 | |||||||||
| Expr1159033 | |||||||||
| Expr2012651 | |||||||||
| Expr2030887 | |||||||||
| Drives_construct | WBCnstr00029955 | ||||||||
| Construct_product | WBCnstr00029955 | ||||||||
| Microarray_results (19) | |||||||||
| Expression_cluster (149) | |||||||||
| Interaction | WBInteraction000274868 | ||||||||
| WBInteraction000309301 | |||||||||
| WBInteraction000354369 | |||||||||
| WBInteraction000365089 | |||||||||
| WBInteraction000426467 | |||||||||
| WBInteraction000448204 | |||||||||
| WBInteraction000544328 | |||||||||
| WBInteraction000544509 | |||||||||
| WBInteraction000578569 | |||||||||
| Map_info | Map | IV | Position | 4.12992 | |||||
| Positive | Positive_clone | Y11D7A | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Pseudo_map_position | |||||||||
| Reference | WBPaper00025258 | ||||||||
| WBPaper00038491 | |||||||||
| WBPaper00055090 | |||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
