WormBase Tree Display for Gene: WBGene00012493
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| WBGene00012493 | SMap | S_parent | Sequence | Y20C6A | ||||||
|---|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 2 | ||||||||
| Name | Sequence_name | Y20C6A.3 | ||||||||
| Molecular_name | Y20C6A.3 | |||||||||
| Other_name | CELE_Y20C6A.3 | Accession_evidence | NDB | BX284605 | ||||||
| Public_name | Y20C6A.3 | |||||||||
| DB_info | Database | AceView | gene | 5R863 | ||||||
| WormQTL | gene | WBGene00012493 | ||||||||
| NDB | locus_tag | CELE_Y20C6A.3 | ||||||||
| NCBI | gene | 189499 | ||||||||
| Species | Caenorhabditis elegans | |||||||||
| History | Version_change | 1 | 26 May 2004 16:54:53 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of WS125 | |||
| 2 | 25 Sep 2008 13:39:49 | WBPerson4025 | Event | Changed_class | CDS | Pseudogene | ||||
| Status | Live | |||||||||
| Gene_info | Biotype | SO:0000336 | ||||||||
| Allele (47) | ||||||||||
| RNASeq_FPKM (74) | ||||||||||
| Paralog | WBGene00022066 | Caenorhabditis elegans | From_analysis | modENCODE_Pseudogenes | ||||||
| Structured_description | Automated_description | Is affected by several genes including eat-2; sir-2.1; and pgl-1 based on RNA-seq and microarray studies. Is affected by four chemicals including Psoralens; allantoin; and Sirolimus based on RNA-seq studies. | Paper_evidence | WBPaper00065943 | ||||||
| Curator_confirmed | WBPerson324 | |||||||||
| WBPerson37462 | ||||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | |||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | |||||||||
| Molecular_info | Corresponding_CDS_history | Y20C6A.3:wp195 | ||||||||
| Corresponding_pseudogene | Y20C6A.3 | |||||||||
| Experimental_info | Microarray_results (12) | |||||||||
| Expression_cluster | WBPaper00038438:E.faecalis_24hr_upregulated_TilingArray | |||||||||
| WBPaper00038438:P.lumniescens_24hr_upregulated_TilingArray | ||||||||||
| WBPaper00050859:upregulated_P-granule(-)GFP(+)_vs_control_day2-adult | ||||||||||
| WBPaper00050859:upregulated_P-granule(-)GFP(-)_vs_control_day2-adult | ||||||||||
| WBPaper00055354:eat-2(ad1116)_downregulated | ||||||||||
| WBPaper00055354:Rapamycin-Psora-Allantoin_downregulated | ||||||||||
| WBPaper00055354:Rapamycin-Rifampicin-Psora_downregulated | ||||||||||
| WBPaper00061527:sre-33-ZK1025.1_8337 | ||||||||||
| cgc4489_group_2 | ||||||||||
| WBPaper00026929:sir-2.1_overexpression_regulated | ||||||||||
| Interaction (30) | ||||||||||
| Map_info | Positive | Positive_clone | Y20C6A | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Interpolated_map_position | V | 12.8927 | ||||||||
| Method | Gene |
