WormBase Tree Display for Gene: WBGene00012497
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WBGene00012497 | SMap | S_parent | Sequence | CHROMOSOME_IV | |||
---|---|---|---|---|---|---|---|
Identity (6) | |||||||
Gene_info | Biotype | SO:0001217 | |||||
Gene_class | ragc | ||||||
Allele (24) | |||||||
Strain | WBStrain00001910 | ||||||
RNASeq_FPKM (74) | |||||||
GO_annotation (13) | |||||||
Ortholog (42) | |||||||
Paralog | WBGene00006414 | Caenorhabditis elegans | From_analysis | Panther | |||
WormBase-Compara | |||||||
Structured_description | Automated_description | Predicted to enable GTPase activity. Involved in determination of adult lifespan and regulation of autophagosome assembly. Predicted to be located in lysosome and nucleus. Predicted to be part of Gtr1-Gtr2 GTPase complex. Human ortholog(s) of this gene implicated in primary hypomagnesemia. Is an ortholog of human RRAGC (Ras related GTP binding C) and RRAGD (Ras related GTP binding D). | Paper_evidence | WBPaper00065943 | |||
Curator_confirmed | WBPerson324 | ||||||
WBPerson37462 | |||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||
Date_last_updated | 29 Nov 2023 00:00:00 | ||||||
Disease_info | Potential_model | DOID:0060879 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:19903) | ||
Molecular_info | Corresponding_CDS | Y24F12A.2a | |||||
Y24F12A.2b | |||||||
Corresponding_transcript | Y24F12A.2a.1 | ||||||
Y24F12A.2b.1 | |||||||
Other_sequence (53) | |||||||
Associated_feature | WBsf652232 | ||||||
WBsf997890 | |||||||
WBsf230897 | |||||||
WBsf230898 | |||||||
Experimental_info | RNAi_result | WBRNAi00055725 | Inferred_automatically | RNAi_primary | |||
WBRNAi00026631 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00020132 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00036734 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00027510 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00062504 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00090957 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00055726 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00026630 | Inferred_automatically | RNAi_primary | |||||
Expr_pattern | Chronogram918 | ||||||
Expr6910 | |||||||
Expr1015898 | |||||||
Expr1035537 | |||||||
Expr1159247 | |||||||
Expr2015246 | |||||||
Expr2033480 | |||||||
Drives_construct | WBCnstr00002699 | ||||||
WBCnstr00029942 | |||||||
Construct_product | WBCnstr00029942 | ||||||
Microarray_results (18) | |||||||
Expression_cluster (99) | |||||||
Interaction (33) | |||||||
Map_info | Map | IV | Position | 5.04207 | Error | 0.006672 | |
Positive | Positive_clone | Y24F12A | Inferred_automatically | From sequence, transcript, pseudogene data | |||
Pseudo_map_position | |||||||
Reference | WBPaper00038491 | ||||||
WBPaper00043089 | |||||||
WBPaper00055090 | |||||||
WBPaper00056742 | |||||||
WBPaper00056804 | |||||||
WBPaper00059297 | |||||||
WBPaper00061156 | |||||||
WBPaper00061779 | |||||||
WBPaper00062518 | |||||||
WBPaper00064006 | |||||||
Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||
Method | Gene |