WormBase Tree Display for Gene: WBGene00012502
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WBGene00012502 | SMap | S_parent | Sequence | Y26D4A | |||
---|---|---|---|---|---|---|---|
Identity | Version | 2 | |||||
Name | CGC_name | clec-107 | Person_evidence | WBPerson2531 | |||
Sequence_name | Y26D4A.4 | ||||||
Molecular_name | Y26D4A.4a | ||||||
Y26D4A.4a.1 | |||||||
CE39647 | |||||||
Y26D4A.4b | |||||||
CE21485 | |||||||
Y26D4A.4b.1 | |||||||
Other_name | CELE_Y26D4A.4 | Accession_evidence | NDB | BX284601 | |||
Public_name | clec-107 | ||||||
DB_info | Database | AceView | gene | 1N662 | |||
WormQTL | gene | WBGene00012502 | |||||
WormFlux | gene | WBGene00012502 | |||||
NDB | locus_tag | CELE_Y26D4A.4 | |||||
Panther | gene | CAEEL|WormBase=WBGene00012502|UniProtKB=M1ZJ53 | |||||
family | PTHR47629 | ||||||
NCBI | gene | 189545 | |||||
RefSeq | protein | NM_060885.7 | |||||
NM_001306530.3 | |||||||
TrEMBL | UniProtAcc | M1ZJ53 | |||||
Q9U2Q3 | |||||||
UniProt_GCRP | UniProtAcc | M1ZJ53 | |||||
Species | Caenorhabditis elegans | ||||||
History | Version_change (2) | ||||||
Status | Live | ||||||
Gene_info | Biotype | SO:0001217 | |||||
Gene_class | clec | ||||||
Allele (69) | |||||||
RNASeq_FPKM (74) | |||||||
Ortholog (17) | |||||||
Paralog (114) | |||||||
Structured_description | Automated_description | Enriched in NSM and in male based on tiling array and RNA-seq studies. Is affected by several genes including daf-2; eat-2; and sir-2.1 based on microarray and RNA-seq studies. Is affected by eight chemicals including Zidovudine; Psoralens; and allantoin based on RNA-seq and microarray studies. Is predicted to encode a protein with the following domains: C-type lectin-like/link domain superfamily; PAN-like domain; PAN-3 domain; and C-type lectin fold. | Paper_evidence | WBPaper00065943 | |||
Curator_confirmed | WBPerson324 | ||||||
WBPerson37462 | |||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||
Date_last_updated | 29 Nov 2023 00:00:00 | ||||||
Molecular_info | Corresponding_CDS | Y26D4A.4a | |||||
Y26D4A.4b | |||||||
Corresponding_CDS_history | Y26D4A.4:wp153 | ||||||
Corresponding_transcript | Y26D4A.4a.1 | ||||||
Y26D4A.4b.1 | |||||||
Associated_feature | WBsf985772 | ||||||
WBsf220474 | |||||||
WBsf220475 | |||||||
Experimental_info | RNAi_result | WBRNAi00004570 | Inferred_automatically | RNAi_primary | |||
WBRNAi00055748 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00036742 | Inferred_automatically | RNAi_primary | |||||
Expr_pattern | Expr1017832 | ||||||
Expr1159270 | |||||||
Expr2010053 | |||||||
Drives_construct | WBCnstr00029940 | ||||||
Construct_product | WBCnstr00029940 | ||||||
Microarray_results (17) | |||||||
Expression_cluster (59) | |||||||
Interaction (23) | |||||||
Map_info | Map | I | Position | 17.198 | Error | 0.009188 | |
Positive | Positive_clone | Y26D4A | Inferred_automatically | From sequence, transcript, pseudogene data | |||
Pseudo_map_position | |||||||
Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||
Method | Gene |