WormBase Tree Display for Gene: WBGene00012559

WBGene00012559 SMap: S_parent: Sequence: Y37D8A
  Identity: Version: 2
    Name: CGC_name: epg-3 Paper_evidence: WBPaper00036384
          Person_evidence: WBPerson716
      Sequence_name: Y37D8A.22
      Molecular_name (12)
      Other_name: CELE_Y37D8A.22 Accession_evidence: NDB BX284603
      Public_name: epg-3
    DB_info: Database: AceView gene 3O25
        WormQTL gene WBGene00012559
        WormFlux gene WBGene00012559
        NDB locus_tag CELE_Y37D8A.22
        Panther gene CAEEL|WormBase=WBGene00012559|UniProtKB=Q9XWU8
          family PTHR10281
        NCBI gene 176712
        RefSeq protein NM_067287.6
            NM_001372671.1
            NM_001372670.2
            NM_001372669.3
        SwissProt UniProtAcc Q9XWU8
        TrEMBL UniProtAcc A0A486WTI5
            A0A486WXI6
            A0A486WWI5
        UniProt_GCRP UniProtAcc Q9XWU8
    Species: Caenorhabditis elegans
    History: Version_change: 1 26 May 2004 16:54:53 WBPerson1971 Event: Imported: Initial conversion from CDS class of WS125
        2 21 Jun 2010 10:25:58 WBPerson2970 Name_change: CGC_name: epg-3
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: epg
    Allele (182)
    Strain: WBStrain00001254
    RNASeq_FPKM (74)
    GO_annotation (13)
    Ortholog (37)
    Paralog: WBGene00006478 Caenorhabditis elegans From_analysis: Panther
            WormBase-Compara
      WBGene00006890 Caenorhabditis elegans From_analysis: Panther
            WormBase-Compara
    Structured_description: Automated_description: Involved in macroautophagy and negative regulation of autophagosome assembly. Located in cytoplasm. Expressed in body wall musculature and pharyngeal muscle cell. Is an ortholog of human VMP1 (vacuole membrane protein 1). Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: Y37D8A.22a
      Y37D8A.22b
      Y37D8A.22c
      Y37D8A.22d
    Corresponding_CDS_history: Y37D8A.22:wp85
    Corresponding_transcript: Y37D8A.22a.1
      Y37D8A.22b.1
      Y37D8A.22c.1
      Y37D8A.22d.1
    Other_sequence (40)
    Associated_feature: WBsf645680
      WBsf659671
      WBsf994763
      WBsf1016279
      WBsf225949
      WBsf225950
  Experimental_info: RNAi_result: WBRNAi00090867 Inferred_automatically: RNAi_primary
      WBRNAi00092360 Inferred_automatically: RNAi_primary
      WBRNAi00091201 Inferred_automatically: RNAi_primary
      WBRNAi00055882 Inferred_automatically: RNAi_primary
      WBRNAi00092359 Inferred_automatically: RNAi_primary
      WBRNAi00020217 Inferred_automatically: RNAi_primary
      WBRNAi00036788 Inferred_automatically: RNAi_primary
      WBRNAi00091200 Inferred_automatically: RNAi_primary
      WBRNAi00006388 Inferred_automatically: RNAi_primary
    Expr_pattern: Expr6932
      Expr9073
      Expr1022581
      Expr1035561
      Expr1159406
      Expr2011342
      Expr2029578
    Drives_construct: WBCnstr00002149
      WBCnstr00007049
      WBCnstr00013702
    Construct_product: WBCnstr00007049
      WBCnstr00013702
    Microarray_results (19)
    Expression_cluster (72)
    Interaction: WBInteraction000504402
      WBInteraction000504405
      WBInteraction000504407
      WBInteraction000504410
      WBInteraction000582549
  Map_info: Map: III Position: 20.3904 Error: 0.130682
    Positive: Positive_clone: Y37D8A Inferred_automatically: From sequence, transcript, pseudogene data
    Pseudo_map_position
  Reference (11)
  Remark: Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. CGC_data_submission
  Method: Gene