WormBase Tree Display for Gene: WBGene00012573
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| WBGene00012573 | SMap | S_parent | Sequence | Y37H2C | ||||||
|---|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 2 | ||||||||
| Name | Sequence_name | Y37H2C.1 | ||||||||
| Molecular_name | Y37H2C.1 | |||||||||
| Other_name | CELE_Y37H2C.1 | Accession_evidence | NDB | BX284605 | ||||||
| Public_name | Y37H2C.1 | |||||||||
| DB_info | Database | AceView | gene | 5S756 | ||||||
| WormQTL | gene | WBGene00012573 | ||||||||
| WormFlux | gene | WBGene00012573 | ||||||||
| NDB | locus_tag | CELE_Y37H2C.1 | ||||||||
| NCBI | gene | 189635 | ||||||||
| Species | Caenorhabditis elegans | |||||||||
| History | Version_change | 1 | 26 May 2004 16:54:54 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of WS125 | |||
| 2 | 13 Nov 2017 16:57:48 | WBPerson4025 | Event | Changed_class | CDS | Pseudogene | ||||
| Status | Live | |||||||||
| Gene_info | Biotype | SO:0000336 | ||||||||
| Allele (121) | ||||||||||
| RNASeq_FPKM (74) | ||||||||||
| Ortholog | WBGene00042197 | Caenorhabditis briggsae | From_analysis | Hillier-set | ||||||
| OrthoMCL | ||||||||||
| OMA | ||||||||||
| WBGene00059809 | Caenorhabditis remanei | From_analysis | OMA | |||||||
| WBGene00056542 | Caenorhabditis remanei | From_analysis | OMA | |||||||
| TreeFam | ||||||||||
| WBGene00142263 | Caenorhabditis brenneri | From_analysis | Inparanoid_8 | |||||||
| Paralog | WBGene00004795 | Caenorhabditis elegans | From_analysis | TreeFam | ||||||
| Panther | ||||||||||
| WBGene00006477 | Caenorhabditis elegans | From_analysis | TreeFam | |||||||
| Panther | ||||||||||
| WBGene00015583 | Caenorhabditis elegans | From_analysis | TreeFam | |||||||
| Inparanoid_8 | ||||||||||
| Panther | ||||||||||
| WBGene00014689 | Caenorhabditis elegans | From_analysis | modENCODE_Pseudogenes | |||||||
| WBGene00018205 | Caenorhabditis elegans | From_analysis | Panther | |||||||
| Structured_description | Automated_description | Enriched in GABAergic neurons; OLL; PVD; dopaminergic neurons; and pharyngeal-intestinal valve based on microarray; tiling array; and single-cell RNA-seq studies. Is affected by several genes including daf-16; daf-12; and rrf-3 based on microarray and RNA-seq studies. Is affected by seven chemicals including Alovudine; Zidovudine; and Sodium Chloride based on RNA-seq and microarray studies. | Paper_evidence | WBPaper00065943 | ||||||
| Curator_confirmed | WBPerson324 | |||||||||
| WBPerson37462 | ||||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | |||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | |||||||||
| Molecular_info | Corresponding_CDS_history | Y37H2C.1:wp262 | ||||||||
| Corresponding_pseudogene | Y37H2C.1 | |||||||||
| Associated_feature | WBsf235189 | |||||||||
| Experimental_info | Expr_pattern | Expr1011635 | ||||||||
| Expr1159479 | ||||||||||
| Expr2007281 | ||||||||||
| Expr2025514 | ||||||||||
| Drives_construct | WBCnstr00029903 | |||||||||
| Construct_product | WBCnstr00029903 | |||||||||
| Microarray_results (14) | ||||||||||
| Expression_cluster (103) | ||||||||||
| Interaction | WBInteraction000235626 | |||||||||
| WBInteraction000245749 | ||||||||||
| WBInteraction000460385 | ||||||||||
| WBInteraction000461030 | ||||||||||
| Map_info | Positive | Positive_clone | Y37H2C | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Interpolated_map_position | V | 14.9859 | ||||||||
| Reference | WBPaper00055090 | |||||||||
| WBPaper00063926 | ||||||||||
| Method | Gene |
