WormBase Tree Display for Gene: WBGene00012670
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| WBGene00012670 | SMap | S_parent | Sequence | Y39B6A | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 2 | |||||||
| Name | CGC_name | cpg-23 | Paper_evidence | WBPaper00053350 | |||||
| Sequence_name | Y39B6A.8 | ||||||||
| Molecular_name | Y39B6A.8 | ||||||||
| Y39B6A.8.1 | |||||||||
| CE29882 | |||||||||
| Other_name | Y39B6B.y | Curator_confirmed | WBPerson1983 | ||||||
| Remark | Old cosmid naming mapped via unique overlapping PCR_product on CDSs | ||||||||
| CELE_Y39B6A.8 | Accession_evidence | NDB | BX284605 | ||||||
| Public_name | cpg-23 | ||||||||
| DB_info | Database | AceView | gene | 5T619 | |||||
| WormQTL | gene | WBGene00012670 | |||||||
| WormFlux | gene | WBGene00012670 | |||||||
| NDB | locus_tag | CELE_Y39B6A.8 | |||||||
| NCBI | gene | 180259 | |||||||
| RefSeq | protein | NM_171600.3 | |||||||
| TREEFAM | TREEFAM_ID | TF321454 | |||||||
| TrEMBL | UniProtAcc | Q8MYP4 | |||||||
| UniProt_GCRP | UniProtAcc | Q8MYP4 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 26 May 2004 16:54:54 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of WS125 | ||
| 2 | 09 Jun 2020 18:06:24 | WBPerson1983 | Name_change | CGC_name | cpg-23 | ||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | cpg | ||||||||
| Allele (128) | |||||||||
| RNASeq_FPKM (74) | |||||||||
| Ortholog (18) | |||||||||
| Structured_description | Automated_description | Enriched in IL socket cell; arc ant V; neurons; and seam cell based on single-cell RNA-seq and RNA-seq studies. Is affected by several genes including daf-16; daf-12; and eat-2 based on tiling array; microarray; and RNA-seq studies. Is affected by seven chemicals including methylmercuric chloride; multi-walled carbon nanotube; and stavudine based on microarray and RNA-seq studies. Is predicted to encode a protein with the following domain: Cysteine-rich repeat. | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | Y39B6A.8 | |||||||
| Corresponding_transcript | Y39B6A.8.1 | ||||||||
| Other_sequence | PT00090 | ||||||||
| MA01077 | |||||||||
| Associated_feature | WBsf647693 | ||||||||
| WBsf1003146 | |||||||||
| WBsf1003147 | |||||||||
| WBsf1003148 | |||||||||
| WBsf1003149 | |||||||||
| WBsf1021671 | |||||||||
| WBsf1021672 | |||||||||
| WBsf1021673 | |||||||||
| WBsf1021674 | |||||||||
| WBsf233185 | |||||||||
| Experimental_info | RNAi_result | WBRNAi00056213 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00020393 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00036930 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00009762 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr1010992 | ||||||||
| Expr1035603 | |||||||||
| Expr1159707 | |||||||||
| Expr2007380 | |||||||||
| Expr2025615 | |||||||||
| Microarray_results (27) | |||||||||
| Expression_cluster (107) | |||||||||
| Map_info | Positive | Positive_clone | Y39B6A | Inferred_automatically | From sequence, transcript, pseudogene data | ||||
| Interpolated_map_position | V | 20.2063 | |||||||
| Reference | WBPaper00065080 | ||||||||
| Method | Gene |
