WormBase Tree Display for Gene: WBGene00012682
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WBGene00012682 | SMap | S_parent | Sequence | Y39B6A | |||
---|---|---|---|---|---|---|---|
Identity | Version | 2 | |||||
Name | CGC_name | asp-16 | Person_evidence | WBPerson261 | |||
Sequence_name | Y39B6A.23 | ||||||
Molecular_name | Y39B6A.23 | ||||||
Y39B6A.23.1 | |||||||
CE29864 | |||||||
Other_name | Y39B6B.j | Curator_confirmed | WBPerson1983 | ||||
Remark | Old cosmid naming mapped via unique overlapping PCR_product on CDSs | ||||||
CELE_Y39B6A.23 | Accession_evidence | NDB | BX284605 | ||||
Public_name | asp-16 | ||||||
DB_info | Database (11) | ||||||
Species | Caenorhabditis elegans | ||||||
History | Version_change (2) | ||||||
Status | Live | ||||||
Gene_info | Biotype | SO:0001217 | |||||
Gene_class | asp | ||||||
Allele (103) | |||||||
RNASeq_FPKM (74) | |||||||
GO_annotation | 00084795 | ||||||
00084796 | |||||||
00084797 | |||||||
00119712 | |||||||
00119713 | |||||||
Ortholog (47) | |||||||
Paralog (17) | |||||||
Structured_description | Automated_description | Predicted to enable aspartic-type endopeptidase activity. Predicted to be involved in proteolysis. Predicted to be located in lysosome. Human ortholog(s) of this gene implicated in several diseases, including artery disease (multiple); chronic fatigue syndrome; and congenital adrenal hyperplasia. Is an ortholog of human PGC (progastricsin) and REN (renin). | Paper_evidence | WBPaper00065943 | |||
Curator_confirmed | WBPerson324 | ||||||
WBPerson37462 | |||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||
Date_last_updated | 29 Nov 2023 00:00:00 | ||||||
Disease_info | Potential_model (17) | ||||||
Molecular_info | Corresponding_CDS | Y39B6A.23 | |||||
Corresponding_transcript | Y39B6A.23.1 | ||||||
Other_sequence | ACC21341_1 | ||||||
EY465139.1 | |||||||
MH05110 | |||||||
MH10000 | |||||||
Acan_isotig10539 | |||||||
ACC03533_2 | |||||||
PTC03231_1 | |||||||
SSC02957_1 | |||||||
Associated_feature | WBsf1003109 | ||||||
Experimental_info | RNAi_result | WBRNAi00056177 | Inferred_automatically | RNAi_primary | |||
Expr_pattern | Expr1014753 | ||||||
Expr1159681 | |||||||
Microarray_results | A_12_P111650 | ||||||
GPL14144_Y39B6A.23_1039-1098_0.956_1_A | |||||||
GPL19516_CGZ0044834 | |||||||
GPL21109_Y39B6A.23 | |||||||
GPL3518_CE29864 | |||||||
GPL8304_CE_WBGene00012682_A | |||||||
GPL8673_Y39B6A_23P00167 | |||||||
GPL8673_Y39B6A_23P00601 | |||||||
GPL8673_Y39B6A_23P01056 | |||||||
Expression_cluster (69) | |||||||
Map_info | Map | V | Position | 18.4987 | |||
Positive | Positive_clone | Y39B6A | Inferred_automatically | From sequence, transcript, pseudogene data | |||
Pseudo_map_position | |||||||
Reference | WBPaper00038491 | ||||||
WBPaper00055090 | |||||||
WBPaper00059378 | |||||||
Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||
Method | Gene |