WormBase Tree Display for Gene: WBGene00012684
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| WBGene00012684 | SMap | S_parent | Sequence | Y39B6A | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 2 | |||||||
| Name | Sequence_name | Y39B6A.25 | |||||||
| Molecular_name | Y39B6A.25 | ||||||||
| Y39B6A.25.1 | |||||||||
| CE41179 | |||||||||
| Other_name | Y39B6B.k | Curator_confirmed | WBPerson1983 | ||||||
| Remark | Old cosmid naming mapped via unique overlapping PCR_product on CDSs | ||||||||
| CELE_Y39B6A.25 | Accession_evidence | NDB | BX284605 | ||||||
| Public_name | Y39B6A.25 | ||||||||
| DB_info | Database | AceView | gene | 5T505 | |||||
| WormQTL | gene | WBGene00012684 | |||||||
| WormFlux | gene | WBGene00012684 | |||||||
| NDB | locus_tag | CELE_Y39B6A.25 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00012684|UniProtKB=Q8MYN4 | |||||||
| family | PTHR16442 | ||||||||
| NCBI | gene | 180249 | |||||||
| RefSeq | protein | NM_171579.6 | |||||||
| TREEFAM | TREEFAM_ID | TF316938 | |||||||
| TrEMBL | UniProtAcc | Q8MYN4 | |||||||
| UniProt_GCRP | UniProtAcc | Q8MYN4 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 26 May 2004 16:54:54 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of WS125 | ||
| 2 | 11 May 2007 12:05:34 | WBPerson4025 | Event | Acquires_merge | WBGene00012685 | ||||
| Acquires_merge | WBGene00012685 | ||||||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Allele (148) | |||||||||
| RNASeq_FPKM (74) | |||||||||
| Ortholog (26) | |||||||||
| Paralog | WBGene00017992 | Caenorhabditis elegans | From_analysis | TreeFam | |||||
| Structured_description | Automated_description | Enriched in male based on RNA-seq studies. Is affected by several genes including daf-16; eat-2; and clk-1 based on microarray and RNA-seq studies. Is affected by fifteen chemicals including methylmercuric chloride; manganese chloride; and multi-walled carbon nanotube based on microarray and RNA-seq studies. Is predicted to encode a protein with the following domains: RING finger protein 17 and Tudor domain. | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | Y39B6A.25 | |||||||
| Corresponding_CDS_history | Y39B6A.25:wp176 | ||||||||
| Corresponding_transcript | Y39B6A.25.1 | ||||||||
| Associated_feature (18) | |||||||||
| Experimental_info | RNAi_result | WBRNAi00056180 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00056179 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr1024417 | ||||||||
| Expr1159683 | |||||||||
| Expr2007367 | |||||||||
| Expr2025601 | |||||||||
| Microarray_results (22) | |||||||||
| Expression_cluster (130) | |||||||||
| Interaction | WBInteraction000575592 | ||||||||
| Map_info | Positive | Positive_clone | Y39B6A | Inferred_automatically | From sequence, transcript, pseudogene data | ||||
| Interpolated_map_position | V | 18.4964 | |||||||
| Reference | WBPaper00065308 | ||||||||
| Method | Gene |
