WormBase Tree Display for Gene: WBGene00012703
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| WBGene00012703 | SMap | S_parent | Sequence | Y39B6A | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 3 | |||||||
| Name | CGC_name | nhr-145 | Person_evidence | WBPerson600 | |||||
| Sequence_name | Y39B6A.47 | ||||||||
| Molecular_name | Y39B6A.47a | ||||||||
| Y39B6A.47a.1 | |||||||||
| CE41946 | |||||||||
| Y39B6A.47b | |||||||||
| CE46086 | |||||||||
| Y39B6A.47b.1 | |||||||||
| Other_name | Y39B6B.c | Curator_confirmed | WBPerson1983 | ||||||
| Remark | Old cosmid naming mapped via unique overlapping PCR_product on CDSs | ||||||||
| CELE_Y39B6A.47 | Accession_evidence | NDB | BX284605 | ||||||
| Public_name | nhr-145 | ||||||||
| DB_info | Database | AceView | gene | 5T569 | |||||
| WormQTL | gene | WBGene00012703 | |||||||
| WormFlux | gene | WBGene00012703 | |||||||
| NDB | locus_tag | CELE_Y39B6A.47 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00012703|UniProtKB=Q9NEV6 | |||||||
| family | PTHR45680 | ||||||||
| NCBI | gene | 180255 | |||||||
| RefSeq | protein | NM_001269913.3 | |||||||
| NM_001269912.3 | |||||||||
| TrEMBL | UniProtAcc | Q9NEV6 | |||||||
| F3Y5S7 | |||||||||
| UniProt_GCRP | UniProtAcc | Q9NEV6 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 26 May 2004 16:54:54 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of WS125 | ||
| 2 | 22 Jul 2005 10:29:11 | WBPerson2970 | Name_change | CGC_name | nhr-145 | ||||
| 3 | 22 Nov 2007 12:13:52 | WBPerson4025 | Event | Split_into | WBGene00077457 | ||||
| Split_into | WBGene00077457 | ||||||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | nhr | ||||||||
| Allele (167) | |||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation | 00008646 | ||||||||
| 00096487 | |||||||||
| 00096488 | |||||||||
| 00096489 | |||||||||
| 00119727 | |||||||||
| 00119728 | |||||||||
| 00119729 | |||||||||
| 00119730 | |||||||||
| Ortholog (24) | |||||||||
| Paralog (217) | |||||||||
| Structured_description | Automated_description | Predicted to enable DNA-binding transcription factor activity; sequence-specific DNA binding activity; and zinc ion binding activity. Predicted to be involved in regulation of DNA-templated transcription. Predicted to be located in nucleus. | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | Y39B6A.47a | |||||||
| Y39B6A.47b | |||||||||
| Corresponding_CDS_history | Y39B6A.47:wp123 | ||||||||
| Y39B6A.47:wp185 | |||||||||
| Corresponding_transcript | Y39B6A.47a.1 | ||||||||
| Y39B6A.47b.1 | |||||||||
| Other_sequence (21) | |||||||||
| Associated_feature (15) | |||||||||
| Transcription_factor | WBTranscriptionFactor000925 | ||||||||
| Experimental_info | Expr_pattern | Expr1024729 | |||||||
| Expr1035619 | |||||||||
| Expr1159701 | |||||||||
| Expr2014045 | |||||||||
| Expr2032285 | |||||||||
| Microarray_results (12) | |||||||||
| Expression_cluster (53) | |||||||||
| Interaction | WBInteraction000552721 | ||||||||
| Map_info | Map | V | Position | 19.7973 | Error | 0.194985 | |||
| Positive | Positive_clone | Y39B6A | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Pseudo_map_position | |||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
