WormBase Tree Display for Gene: WBGene00012709
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| WBGene00012709 | SMap | S_parent | Sequence | Y39C12A | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 2 | |||||||
| Name | CGC_name | sre-15 | Person_evidence | WBPerson522 | |||||
| Sequence_name | Y39C12A.7 | ||||||||
| Molecular_name | Y39C12A.7 | ||||||||
| Y39C12A.7.1 | |||||||||
| CE45415 | |||||||||
| Other_name | CELE_Y39C12A.7 | Accession_evidence | NDB | BX284604 | |||||
| Public_name | sre-15 | ||||||||
| DB_info | Database | AceView | gene | 4N4 | |||||
| WormQTL | gene | WBGene00012709 | |||||||
| WormFlux | gene | WBGene00012709 | |||||||
| NDB | locus_tag | CELE_Y39C12A.7 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00012709|UniProtKB=Q9U2L3 | |||||||
| family | PTHR47518 | ||||||||
| NCBI | gene | 189749 | |||||||
| RefSeq | protein | NM_069924.6 | |||||||
| TREEFAM | TREEFAM_ID | TF316213 | |||||||
| TrEMBL | UniProtAcc | Q9U2L3 | |||||||
| UniProt_GCRP | UniProtAcc | Q9U2L3 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 26 May 2004 16:54:54 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of WS125 | ||
| 2 | 18 Jan 2005 14:50:06 | WBPerson2970 | Name_change | CGC_name | sre-15 | ||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | sre | ||||||||
| Allele (57) | |||||||||
| Strain | WBStrain00037478 | ||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation | 00099360 | ||||||||
| 00099361 | |||||||||
| 00119737 | |||||||||
| 00119738 | |||||||||
| Ortholog (15) | |||||||||
| Paralog (46) | |||||||||
| Structured_description | Automated_description | Predicted to be involved in sensory perception of chemical stimulus. Predicted to be located in membrane. | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | Y39C12A.7 | |||||||
| Corresponding_CDS_history | Y39C12A.7:wp139 | ||||||||
| Y39C12A.7:wp166 | |||||||||
| Y39C12A.7:wp219 | |||||||||
| Corresponding_transcript | Y39C12A.7.1 | ||||||||
| Associated_feature | WBsf998065 | ||||||||
| WBsf1018348 | |||||||||
| WBsf230984 | |||||||||
| Experimental_info | RNAi_result | WBRNAi00036934 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00056222 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr1022619 | ||||||||
| Expr1159712 | |||||||||
| Expr2016269 | |||||||||
| Expr2034498 | |||||||||
| Microarray_results (13) | |||||||||
| Expression_cluster (52) | |||||||||
| Map_info | Map | IV | Position | 5.81455 | Error | 0.001527 | |||
| Positive | Positive_clone | Y39C12A | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Pseudo_map_position | |||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
