WormBase Tree Display for Gene: WBGene00012806
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| WBGene00012806 | SMap | S_parent | Sequence | CHROMOSOME_III | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 4 | |||||||
| Name | CGC_name | dph-7 | Person_evidence | WBPerson555 | |||||
| Sequence_name | Y43F4B.9 | ||||||||
| Molecular_name | Y43F4B.9a | ||||||||
| Y43F4B.9a.1 | |||||||||
| CE40666 | |||||||||
| Y43F4B.9b | |||||||||
| CE54303 | |||||||||
| Y43F4B.9a.2 | |||||||||
| Y43F4B.9b.1 | |||||||||
| Other_name | CELE_Y43F4B.9 | Accession_evidence | NDB | BX284603 | |||||
| Public_name | dph-7 | ||||||||
| DB_info | Database (13) | ||||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 26 May 2004 16:54:54 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of WS125 | ||
| 2 | 20 Feb 2007 13:08:57 | WBPerson1983 | Event | Split_into | WBGene00045284 | ||||
| 3 | 27 May 2009 17:07:01 | WBPerson1983 | Event | Acquires_merge | WBGene00045284 | ||||
| 4 | 14 Jun 2021 09:31:36 | WBPerson1983 | Name_change | CGC_name | dph-7 | ||||
| Acquires_merge | WBGene00045284 | ||||||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | dph | ||||||||
| Allele (65) | |||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation | 00009497 | ||||||||
| 00009498 | |||||||||
| 00009499 | |||||||||
| 00009500 | |||||||||
| Contained_in_operon | CEOP3780 | ||||||||
| Ortholog (34) | |||||||||
| Structured_description | Automated_description | Predicted to enable diphthine methylesterase activity. Predicted to be involved in protein histidyl modification to diphthamide. Predicted to be located in cytoplasm. Is an ortholog of human DPH7 (diphthamide biosynthesis 7). | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | Y43F4B.9a | |||||||
| Y43F4B.9b | |||||||||
| Corresponding_CDS_history | Y43F4B.9:wp169 | ||||||||
| Y43F4B.9:wp172 | |||||||||
| Y43F4B.9b:wp279 | |||||||||
| Corresponding_transcript | Y43F4B.9a.1 | ||||||||
| Y43F4B.9a.2 | |||||||||
| Y43F4B.9b.1 | |||||||||
| Other_sequence (24) | |||||||||
| Experimental_info | RNAi_result | WBRNAi00056497 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00056496 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00006253 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr1024127 | ||||||||
| Expr1035666 | |||||||||
| Expr1159963 | |||||||||
| Expr2007492 | |||||||||
| Expr2025728 | |||||||||
| Microarray_results (22) | |||||||||
| Expression_cluster (51) | |||||||||
| Map_info | Map | III | Position | 21.2102 | |||||
| Positive | Positive_clone | Y43F4B | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Pseudo_map_position | |||||||||
| Reference | WBPaper00055090 | ||||||||
| Remark | [090527 pad] Merged the genes back together following data from new sequencing technologies. | ||||||||
| Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | ||||||||
| Method | Gene |
