WormBase Tree Display for Gene: WBGene00012860
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| WBGene00012860 | SMap | S_parent | Sequence | Y45F3A | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 2 | |||||||
| Name | CGC_name | acdh-11 | Person_evidence | WBPerson7030 | |||||
| WBPerson1657 | |||||||||
| Sequence_name | Y45F3A.3 | ||||||||
| Molecular_name | Y45F3A.3a | ||||||||
| Y45F3A.3a.1 | |||||||||
| CE19166 | |||||||||
| Y45F3A.3b | |||||||||
| CE39116 | |||||||||
| Y45F3A.3b.1 | |||||||||
| Other_name | CELE_Y45F3A.3 | Accession_evidence | NDB | BX284603 | |||||
| Public_name | acdh-11 | ||||||||
| DB_info | Database (11) | ||||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 26 May 2004 16:54:54 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of WS125 | ||
| 2 | 17 Apr 2008 14:02:17 | WBPerson2970 | Name_change | CGC_name | acdh-10 | ||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | acdh | ||||||||
| Allele (123) | |||||||||
| Strain | WBStrain00001674 | ||||||||
| WBStrain00006143 | |||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation | 00103962 | ||||||||
| 00103963 | |||||||||
| 00103964 | |||||||||
| 00103965 | |||||||||
| 00103966 | |||||||||
| 00103967 | |||||||||
| 00103968 | |||||||||
| 00103969 | |||||||||
| 00119847 | |||||||||
| Contained_in_operon | CEOP3680 | ||||||||
| Ortholog (34) | |||||||||
| Paralog (22) | |||||||||
| Structured_description | Concise_description | acdh-11 encodes a protein that is similar to acyl-CoA dehydrogenase; crystal structure of ACDH-11 shows its selective and high-affinity binding to C11/C12-chain fatty acids but it does not appear to exhibit C11/C12-CoA dehydrogenase activity; evidence suggests that ACDH-11 sequesters C11/C12-chain fatty acids and prevents these low-abundance fatty acids from activating nuclear hormone receptors and driving fat-7 expression. | Paper_evidence | WBPaper00046830 | |||||
| Person_evidence | WBPerson10688 | ||||||||
| Curator_confirmed | WBPerson324 | ||||||||
| Date_last_updated | 29 Oct 2015 00:00:00 | ||||||||
| Automated_description | Enables fatty acid binding activity. Involved in adaptive thermogenesis. Expressed in head. | Paper_evidence | WBPaper00065943 | ||||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | Y45F3A.3a | |||||||
| Y45F3A.3b | |||||||||
| Corresponding_transcript | Y45F3A.3a.1 | ||||||||
| Y45F3A.3b.1 | |||||||||
| Other_sequence (33) | |||||||||
| Associated_feature | WBsf034291 | ||||||||
| WBsf645572 | |||||||||
| WBsf994076 | |||||||||
| WBsf994077 | |||||||||
| WBsf1015817 | |||||||||
| WBsf225737 | |||||||||
| Experimental_info | RNAi_result | WBRNAi00037104 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00006952 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00056612 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00020612 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00103793 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00056613 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00006158 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Chronogram1416 | ||||||||
| Expr6979 | |||||||||
| Expr12282 | |||||||||
| Expr1026481 | |||||||||
| Expr1035688 | |||||||||
| Expr1160077 | |||||||||
| Expr2009129 | |||||||||
| Expr2027366 | |||||||||
| Drives_construct | WBCnstr00004310 | ||||||||
| WBCnstr00020553 | |||||||||
| WBCnstr00029812 | |||||||||
| Construct_product | WBCnstr00020886 | ||||||||
| WBCnstr00029812 | |||||||||
| Microarray_results (24) | |||||||||
| Expression_cluster (105) | |||||||||
| Interaction (73) | |||||||||
| Map_info | Map | III | Position | 3.71336 | Error | 0.049183 | |||
| Positive | Positive_clone | Y45F3A | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Pseudo_map_position | |||||||||
| Reference | WBPaper00036129 | ||||||||
| WBPaper00042257 | |||||||||
| WBPaper00046830 | |||||||||
| WBPaper00053788 | |||||||||
| WBPaper00062388 | |||||||||
| WBPaper00064661 | |||||||||
| WBPaper00065140 | |||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
