WormBase Tree Display for Gene: WBGene00012911
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| WBGene00012911 | SMap | S_parent | Sequence | Y46G5A | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 2 | |||||||
| Name | CGC_name | acl-7 | Person_evidence | WBPerson1105 | |||||
| Sequence_name | Y46G5A.21 | ||||||||
| Molecular_name | Y46G5A.21 | ||||||||
| Y46G5A.21.1 | |||||||||
| CE31115 | |||||||||
| Other_name | CELE_Y46G5A.21 | Accession_evidence | NDB | BX284602 | |||||
| Public_name | acl-7 | ||||||||
| DB_info | Database (11) | ||||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 26 May 2004 16:54:54 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of WS125 | ||
| 2 | 02 Jul 2004 16:55:44 | WBPerson1971 | Name_change | CGC_name | acl-7 | ||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | acl | ||||||||
| Allele (305) | |||||||||
| Strain | WBStrain00004024 | ||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation (14) | |||||||||
| Ortholog (33) | |||||||||
| Paralog | WBGene00017261 | Caenorhabditis elegans | From_analysis | Panther | |||||
| WormBase-Compara | |||||||||
| Structured_description | Concise_description | acl-7 is an ortholog of human GNPAT (glyceronephosphate O-acyltransferase); ACL-7 is required for the biosynthesis of ether lipids. | Paper_evidence | WBPaper00048987 | |||||
| Person_evidence | WBPerson681 | ||||||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson1823 | |||||||||
| WBPerson567 | |||||||||
| Date_last_updated | 06 Aug 2004 00:00:00 | ||||||||
| Automated_description | Predicted to enable glycerol-3-phosphate O-acyltransferase activity and glycerone-phosphate O-acyltransferase activity. Predicted to be involved in cellular lipid metabolic process. Predicted to be located in mitochondrial membrane and peroxisomal membrane. Human ortholog(s) of this gene implicated in rhizomelic chondrodysplasia punctata type 2. Is an ortholog of human GNPAT (glyceronephosphate O-acyltransferase). | Paper_evidence | WBPaper00065943 | ||||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Disease_info | Potential_model | DOID:0110852 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:4416) | ||||
| Molecular_info | Corresponding_CDS | Y46G5A.21 | |||||||
| Corresponding_CDS_history | Y46G5A.21:wp80 | ||||||||
| Corresponding_transcript | Y46G5A.21.1 | ||||||||
| Other_sequence | JI470847.1 | ||||||||
| Hbac_isotig01960 | |||||||||
| Oden_isotig19697 | |||||||||
| Acan_isotig18797 | |||||||||
| JI176250.1 | |||||||||
| Dviv_isotig20738 | |||||||||
| Tcol_isotig17305 | |||||||||
| CBC15214_1 | |||||||||
| Dviv_isotig20737 | |||||||||
| Associated_feature | WBsf224108 | ||||||||
| WBsf224109 | |||||||||
| Experimental_info | RNAi_result | WBRNAi00020668 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00037133 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00056679 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr1011668 | ||||||||
| Expr1160150 | |||||||||
| Expr2009158 | |||||||||
| Expr2027395 | |||||||||
| Drives_construct | WBCnstr00029792 | ||||||||
| Construct_product | WBCnstr00029792 | ||||||||
| Microarray_results (17) | |||||||||
| Expression_cluster (146) | |||||||||
| Interaction (15) | |||||||||
| Map_info | Map | II | Position | 11.3349 | Error | 0.027509 | |||
| Positive | Positive_clone | Y46G5A | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Pseudo_map_position | |||||||||
| Reference | WBPaper00038491 | ||||||||
| WBPaper00042257 | |||||||||
| WBPaper00048987 | |||||||||
| WBPaper00055090 | |||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
