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WormBase Tree Display for Gene: WBGene00012943

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Name Class

WBGene00012943SMapS_parentSequenceY47D3B
IdentityVersion2
NameCGC_namebed-2Person_evidenceWBPerson1997
Sequence_nameY47D3B.9
Molecular_nameY47D3B.9a
Y47D3B.9a.1
CE53688
Y47D3B.9b
CE53756
Y47D3B.9b.1
Other_nameCELE_Y47D3B.9Accession_evidenceNDBBX284603
Public_namebed-2
DB_infoDatabaseAceViewgene3M554
WormQTLgeneWBGene00012943
WormFluxgeneWBGene00012943
NDBlocus_tagCELE_Y47D3B.9
PanthergeneCAEEL|WormBase=WBGene00012943|UniProtKB=Q9XWZ9
familyPTHR11909
NCBIgene176576
RefSeqproteinNM_001374881.3
NM_001374882.4
TrEMBLUniProtAccA0A5K1IBA7
A0A5K1IAD3
UniProt_GCRPUniProtAccA0A5K1IBA7
SpeciesCaenorhabditis elegans
HistoryVersion_change126 May 2004 16:54:54WBPerson1971EventImportedInitial conversion from CDS class of WS125
218 Apr 2008 09:32:24WBPerson2970Name_changeCGC_namebed-2
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classbed
Allele (161)
StrainWBStrain00055556
RNASeq_FPKM (74)
GO_annotation00004112
00004113
00004114
00004115
00004116
00004117
00004118
00119913
Ortholog (26)
Structured_descriptionAutomated_descriptionPredicted to enable protein serine/threonine kinase activity. Predicted to be involved in several processes, including endocytosis; positive regulation of canonical Wnt signaling pathway; and positive regulation of proteasomal ubiquitin-dependent protein catabolic process. Predicted to be located in nucleus.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSY47D3B.9a
Y47D3B.9b
Corresponding_CDS_historyY47D3B.9:wp273
Corresponding_transcriptY47D3B.9a.1
Y47D3B.9b.1
Other_sequence (28)
Associated_feature (28)
Transcription_factorWBTranscriptionFactor001154
Experimental_infoRNAi_resultWBRNAi00056776Inferred_automaticallyRNAi_primary
WBRNAi00006414Inferred_automaticallyRNAi_primary
WBRNAi00020706Inferred_automaticallyRNAi_primary
WBRNAi00002037Inferred_automaticallyRNAi_primary
WBRNAi00108615Inferred_automaticallyRNAi_primary
WBRNAi00000451Inferred_automaticallyRNAi_primary
WBRNAi00108540Inferred_automaticallyRNAi_primary
WBRNAi00037171Inferred_automaticallyRNAi_primary
Expr_patternExpr1022397
Expr1035739
Expr1160231
Expr2009590
Expr2027827
Drives_constructWBCnstr00029780
Construct_productWBCnstr00029780
Microarray_results (18)
Expression_cluster (108)
Interaction (22)
Map_infoMapIIIPosition9.75735Error0.102214
PositivePositive_cloneY47D3BInferred_automaticallyFrom sequence, transcript, pseudogene data
Pseudo_map_position
RemarkMap position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC.CGC_data_submission
MethodGene