WormBase Tree Display for Gene: WBGene00013032
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| WBGene00013032 | SMap | S_parent | Sequence | Y49E10 | ||||||
|---|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 4 | ||||||||
| Name | CGC_name | wht-9 | Person_evidence | WBPerson253 | ||||||
| Sequence_name | Y49E10.9 | |||||||||
| Molecular_name | Y49E10.9 | |||||||||
| Other_name | tag-222 | Person_evidence | WBPerson201 | |||||||
| CELE_Y49E10.9 | Accession_evidence | NDB | BX284603 | |||||||
| Public_name | wht-9 | |||||||||
| DB_info | Database | AceView | gene | 3N478 | ||||||
| WormQTL | gene | WBGene00013032 | ||||||||
| NDB | locus_tag | CELE_Y49E10.9 | ||||||||
| NCBI | gene | 190068 | ||||||||
| Species | Caenorhabditis elegans | |||||||||
| History | Version_change | 1 | 26 May 2004 16:54:54 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of WS125 | |||
| 2 | 22 Dec 2004 16:59:41 | WBPerson2970 | Name_change | CGC_name | tag-222 | |||||
| 3 | 04 Jun 2007 15:54:19 | WBPerson2970 | Name_change | CGC_name | wht-9 | |||||
| Other_name | tag-222 | |||||||||
| 4 | 03 Jul 2009 15:58:01 | WBPerson1983 | Event | Changed_class | CDS | Pseudogene | ||||
| Status | Live | |||||||||
| Gene_info | Biotype | SO:0000336 | ||||||||
| Gene_class | wht | |||||||||
| Allele (143) | ||||||||||
| Strain | WBStrain00035984 | |||||||||
| RNASeq_FPKM (74) | ||||||||||
| Ortholog | WBGene00140551 | Caenorhabditis brenneri | From_analysis | OMA | ||||||
| Paralog | WBGene00008950 | Caenorhabditis elegans | From_analysis | modENCODE_Pseudogenes | ||||||
| Structured_description | Automated_description | Is affected by several genes including daf-2; glp-1; and eat-2 based on microarray; RNA-seq; and tiling array studies. Is affected by eight chemicals including methylmercuric chloride; multi-walled carbon nanotube; and metformin based on microarray and RNA-seq studies. | Paper_evidence | WBPaper00065943 | ||||||
| Curator_confirmed | WBPerson324 | |||||||||
| WBPerson37462 | ||||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | |||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | |||||||||
| Molecular_info | Corresponding_CDS_history | Y49E10.9:wp206 | ||||||||
| Corresponding_pseudogene | Y49E10.9 | |||||||||
| Other_sequence | Dviv_isotig19353 | |||||||||
| JI230552.1 | ||||||||||
| Experimental_info | Expr_pattern | Expr1012886 | ||||||||
| Microarray_results (14) | ||||||||||
| Expression_cluster (70) | ||||||||||
| Interaction (17) | ||||||||||
| Map_info | Map | III | Position | 17.4362 | Error | 0.053708 | ||||
| Positive | Positive_clone | Y49E10 | Inferred_automatically | From sequence, transcript, pseudogene data | ||||||
| Mapping_data | Multi_point | 4990 | ||||||||
| 4798 | ||||||||||
| 5529 | ||||||||||
| Pseudo_map_position | ||||||||||
| Reference | WBPaper00027644 | |||||||||
| WBPaper00031484 | ||||||||||
| WBPaper00038491 | ||||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | ||||||||
| Method | Gene |
