WormBase Tree Display for Gene: WBGene00013121

WBGene00013121 SMap: S_parent: Sequence: Y52B11A
  Identity: Version: 2
    Name: CGC_name: spe-38 Person_evidence: WBPerson252
      Sequence_name: Y52B11A.1
      Molecular_name: Y52B11A.1
        Y52B11A.1.1
        CE34228
      Other_name: CELE_Y52B11A.1 Accession_evidence: NDB BX284601
      Public_name: spe-38
    DB_info: Database: AceView gene 1L556
        WormQTL gene WBGene00013121
        WormFlux gene WBGene00013121
        NDB locus_tag CELE_Y52B11A.1
        NCBI gene 190181
        RefSeq protein NM_060452.9
        TREEFAM TREEFAM_ID TF343236
        TrEMBL UniProtAcc Q9XWF5
        UniProt_GCRP UniProtAcc Q9XWF5
    Species: Caenorhabditis elegans
    History: Version_change: 1 26 May 2004 16:54:54 WBPerson1971 Event: Imported: Initial conversion from CDS class of WS125
        2 20 Jul 2005 12:16:05 WBPerson2970 Name_change: CGC_name: spe-38
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: spe
    Allele (41)
    Strain: WBStrain00000057
      WBStrain00054635
    RNASeq_FPKM (74)
    GO_annotation: 00103467
      00103468
      00103469
      00103470
    Ortholog (18)
    Structured_description: Concise_description: spe-38 is predicted to encode a novel four-pass transmembrane protein without strong homology to known proteins except C. briggsae SPE-38; spe-38 is required in both male and hermaphrodite sperm for fertilization of oocytes, probably for sperm entry, ; spe-38 is enriched in spermatids and sperm and is localized to the sperm pseudopod membrane consistent with a role in sperm-egg interaction and/or fusion. Paper_evidence: WBPaper00025228
          Curator_confirmed: WBPerson324
          Date_last_updated: 13 Aug 2010 00:00:00
      Automated_description: Involved in sperm entry. Located in cell cortex. Expressed in sperm and spermatid. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: Y52B11A.1
    Corresponding_CDS_history: Y52B11A.1:wp101
    Corresponding_transcript: Y52B11A.1.1
    Other_sequence: BMC18214_1
      CJC02634_1
      FK809698.1
    Associated_feature: WBsf985135
      WBsf985136
      WBsf985137
      WBsf1010614
      WBsf1010615
      WBsf1010616
      WBsf220304
  Experimental_info: RNAi_result: WBRNAi00037383 Inferred_automatically: RNAi_primary
      WBRNAi00004694 Inferred_automatically: RNAi_primary
      WBRNAi00057218 Inferred_automatically: RNAi_primary
    Expr_pattern: Expr3285
      Expr1021198
      Expr1160653
      Expr2034273
    Drives_construct: WBCnstr00015869
    Construct_product: WBCnstr00005238
      WBCnstr00015869
    Antibody: WBAntibody00000879
      WBAntibody00000926
    Microarray_results (17)
    Expression_cluster (70)
    Interaction (95)
    WBProcess: WBbiopr:00000067
  Map_info: Positive: Positive_clone: Y52B11A Inferred_automatically: From sequence, transcript, pseudogene data
    Mapping_data: Multi_point: 5481
        4410
    Interpolated_map_position: I 6.20534
    Pseudo_map_position
  Reference (17)
  Remark: Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. CGC_data_submission
  Method: Gene