WormBase Tree Display for Gene: WBGene00013170
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| WBGene00013170 | SMap | S_parent | Sequence | Y53F4B | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 3 | |||||||
| Name | Sequence_name | Y53F4B.24 | |||||||
| Molecular_name | Y53F4B.24a | ||||||||
| Y53F4B.24a.1 | |||||||||
| CE47701 | |||||||||
| Y53F4B.24b | |||||||||
| CE54253 | |||||||||
| Y53F4B.24b.1 | |||||||||
| Other_name | CELE_Y53F4B.24 | Accession_evidence | NDB | BX284602 | |||||
| Public_name | Y53F4B.24 | ||||||||
| DB_info | Database | AceView | gene | 2P410 | |||||
| WormQTL | gene | WBGene00013170 | |||||||
| WormFlux | gene | WBGene00013170 | |||||||
| NDB | locus_tag | CELE_Y53F4B.24 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00013170|UniProtKB=Q9NAB6 | |||||||
| family | PTHR36947 | ||||||||
| NCBI | gene | 190221 | |||||||
| RefSeq | protein | NM_001393239.1 | |||||||
| NM_064709.3 | |||||||||
| TrEMBL | UniProtAcc | Q9NAB6 | |||||||
| A0A7R9SV95 | |||||||||
| UniProt_GCRP | UniProtAcc | A0A7R9SV95 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 26 May 2004 16:54:54 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of WS125 | ||
| 2 | 18 May 2012 15:41:04 | WBPerson1983 | Event | Split_into | WBGene00219491 | ||||
| 3 | 18 May 2012 15:41:23 | WBPerson1983 | Event | Split_into | WBGene00219492 | ||||
| Split_into | WBGene00219491 | ||||||||
| WBGene00219492 | |||||||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Allele (64) | |||||||||
| RNASeq_FPKM (74) | |||||||||
| Ortholog (64) | |||||||||
| Paralog | WBGene00007601 | Caenorhabditis elegans | From_analysis | Panther | |||||
| WBGene00009063 | Caenorhabditis elegans | From_analysis | TreeFam | ||||||
| WBGene00011176 | Caenorhabditis elegans | From_analysis | Panther | ||||||
| WBGene00011475 | Caenorhabditis elegans | From_analysis | TreeFam | ||||||
| WBGene00013721 | Caenorhabditis elegans | From_analysis | TreeFam | ||||||
| WBGene00016012 | Caenorhabditis elegans | From_analysis | TreeFam | ||||||
| WBGene00014874 | Caenorhabditis elegans | From_analysis | modENCODE_Pseudogenes | ||||||
| WBGene00077539 | Caenorhabditis elegans | From_analysis | modENCODE_Pseudogenes | ||||||
| Structured_description | Automated_description | Enriched in ABarpaaa and amphid sheath cell based on RNA-seq and single-cell RNA-seq studies. Is affected by several genes including eat-2; elt-2; and clk-1 based on RNA-seq and microarray studies. Is affected by eleven chemicals including methylmercuric chloride; manganese chloride; and Sodium Chloride based on microarray and RNA-seq studies. | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | Y53F4B.24a | |||||||
| Y53F4B.24b | |||||||||
| Corresponding_CDS_history | Y53F4B.24:wp232 | ||||||||
| Corresponding_transcript | Y53F4B.24a.1 | ||||||||
| Y53F4B.24b.1 | |||||||||
| Associated_feature | WBsf666418 | ||||||||
| WBsf666419 | |||||||||
| WBsf666420 | |||||||||
| WBsf990905 | |||||||||
| WBsf990906 | |||||||||
| WBsf1013949 | |||||||||
| Experimental_info | Expr_pattern | Expr1018922 | |||||||
| Expr1160716 | |||||||||
| Expr2007852 | |||||||||
| Expr2026093 | |||||||||
| Microarray_results | GPL14144_Y53F4B.24_102-161_0.794_86_A | ||||||||
| GPL14144_Y53F4B.24_40-99_0.788_93_B | |||||||||
| GPL19516_CGZ0048883 | |||||||||
| GPL21109_Y53F4B.24 | |||||||||
| Expression_cluster (117) | |||||||||
| Map_info | Positive | Positive_clone | Y53F4B | Inferred_automatically | From sequence, transcript, pseudogene data | ||||
| Interpolated_map_position | II | 24.0969 | |||||||
| Method | Gene |
