WormBase Tree Display for Gene: WBGene00013247
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| WBGene00013247 | SMap | S_parent | Sequence | Y57A10A | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 1 | |||||||
| Name | Sequence_name | Y57A10A.2 | |||||||
| Molecular_name | Y57A10A.2 | ||||||||
| Y57A10A.2.1 | |||||||||
| CE28716 | |||||||||
| Y57A10A.2.2 | |||||||||
| Y57A10A.2.3 | |||||||||
| Other_name | CELE_Y57A10A.2 | Accession_evidence | NDB | BX284602 | |||||
| Public_name | Y57A10A.2 | ||||||||
| DB_info | Database | AceView | gene | 2M439 | |||||
| WormQTL | gene | WBGene00013247 | |||||||
| WormFlux | gene | WBGene00013247 | |||||||
| NDB | locus_tag | CELE_Y57A10A.2 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00013247|UniProtKB=Q9U214 | |||||||
| family | PTHR23362 | ||||||||
| NCBI | gene | 190332 | |||||||
| RefSeq | protein | NM_064181.4 | |||||||
| TREEFAM | TREEFAM_ID | TF322256 | |||||||
| TrEMBL | UniProtAcc | Q9U214 | |||||||
| UniProt_GCRP | UniProtAcc | Q9U214 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 26 May 2004 16:54:54 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of WS125 | ||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Allele (69) | |||||||||
| RNASeq_FPKM (74) | |||||||||
| Contained_in_operon | CEOP2744 | ||||||||
| Ortholog | WBGene00039293 | Caenorhabditis briggsae | From_analysis | OrthoMCL | |||||
| WBGene00023828 | Caenorhabditis briggsae | From_analysis | OrthoMCL | ||||||
| WBGene00147356 | Caenorhabditis brenneri | From_analysis | Inparanoid_8 | ||||||
| WBGene00164680 | Caenorhabditis brenneri | From_analysis | Inparanoid_8 | ||||||
| WBGene00036139 | Caenorhabditis briggsae | From_analysis | Inparanoid_8 | ||||||
| WBGene00213993 | Caenorhabditis japonica | From_analysis | Inparanoid_8 | ||||||
| chrII_pilon.g6103 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||||
| Paralog (37) | |||||||||
| Structured_description | Automated_description | Enriched in ABarppaapp; ABarpppapp; germ line; germline precursor cell; and head mesodermal cell based on RNA-seq and single-cell RNA-seq studies. Is affected by several genes including skn-1; elt-2; and sir-2.1 based on microarray; tiling array; and RNA-seq studies. Is affected by nine chemicals including rotenone; manganese chloride; and stavudine based on RNA-seq studies. Is predicted to encode a protein with the following domains: SPK domain and Domain of unknown function (DUF545). | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | Y57A10A.2 | |||||||
| Corresponding_CDS_history | Y57A10A.2:wp57 | ||||||||
| Corresponding_transcript | Y57A10A.2.1 | ||||||||
| Y57A10A.2.2 | |||||||||
| Y57A10A.2.3 | |||||||||
| Associated_feature | WBsf222241 | ||||||||
| WBsf222242 | |||||||||
| Experimental_info | RNAi_result | WBRNAi00021085 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00061943 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00057621 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00037560 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr1017661 | ||||||||
| Expr1035904 | |||||||||
| Expr1161033 | |||||||||
| Expr2008018 | |||||||||
| Expr2026259 | |||||||||
| Microarray_results (15) | |||||||||
| Expression_cluster (86) | |||||||||
| Map_info | Positive | Positive_clone | Y57A10A | Inferred_automatically | From sequence, transcript, pseudogene data | ||||
| Interpolated_map_position | II | 6.78712 | |||||||
| Method | Gene |
