WormBase Tree Display for Gene: WBGene00013249
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WBGene00013249 | SMap | S_parent | Sequence | Y57A10A | |||||
---|---|---|---|---|---|---|---|---|---|
Identity | Version | 1 | |||||||
Name | Sequence_name | Y57A10A.4 | |||||||
Molecular_name | Y57A10A.4 | ||||||||
Y57A10A.4.1 | |||||||||
CE46423 | |||||||||
Other_name | CELE_Y57A10A.4 | Accession_evidence | NDB | BX284602 | |||||
Public_name | Y57A10A.4 | ||||||||
DB_info | Database | AceView | gene | 2M443 | |||||
WormQTL | gene | WBGene00013249 | |||||||
WormFlux | gene | WBGene00013249 | |||||||
NDB | locus_tag | CELE_Y57A10A.4 | |||||||
Panther | gene | CAEEL|WormBase=WBGene00013249|UniProtKB=Q9NA88 | |||||||
family | PTHR23362 | ||||||||
NCBI | gene | 190333 | |||||||
RefSeq | protein | NM_064183.4 | |||||||
TREEFAM | TREEFAM_ID | TF322256 | |||||||
TrEMBL | UniProtAcc | Q9NA88 | |||||||
UniProt_GCRP | UniProtAcc | Q9NA88 | |||||||
Species | Caenorhabditis elegans | ||||||||
History | Version_change | 1 | 26 May 2004 16:54:54 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of WS125 | ||
Status | Live | ||||||||
Gene_info | Biotype | SO:0001217 | |||||||
Allele (68) | |||||||||
RNASeq_FPKM (74) | |||||||||
Contained_in_operon | CEOP2592 | ||||||||
Ortholog (12) | |||||||||
Paralog (38) | |||||||||
Structured_description | Automated_description | Enriched in AIZL; AIZR; germ line; and germline precursor cell based on RNA-seq and single-cell RNA-seq studies. Is affected by several genes including ced-3; hsf-1; and elt-2 based on microarray and RNA-seq studies. Is affected by eight chemicals including manganese chloride; Alovudine; and stavudine based on RNA-seq studies. Is predicted to encode a protein with the following domains: SPK domain and Domain of unknown function (DUF545). | Paper_evidence | WBPaper00065943 | |||||
Curator_confirmed | WBPerson324 | ||||||||
WBPerson37462 | |||||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
Molecular_info | Corresponding_CDS | Y57A10A.4 | |||||||
Corresponding_CDS_history | Y57A10A.4:wp226 | ||||||||
Corresponding_transcript | Y57A10A.4.1 | ||||||||
Other_sequence | CBC01950_1 | ||||||||
Associated_feature | WBsf990021 | ||||||||
WBsf1013392 | |||||||||
Experimental_info | RNAi_result | WBRNAi00037572 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00058300 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00021088 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00021086 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00057636 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00082547 | Inferred_automatically | RNAi_primary | |||||||
Expr_pattern | Expr1035906 | ||||||||
Expr1161046 | |||||||||
Expr2008021 | |||||||||
Expr2026262 | |||||||||
Microarray_results (15) | |||||||||
Expression_cluster (71) | |||||||||
Map_info | Positive | Positive_clone | Y57A10A | Inferred_automatically | From sequence, transcript, pseudogene data | ||||
Interpolated_map_position | II | 6.80516 | |||||||
Method | Gene |