WormBase Tree Display for Gene: WBGene00013254
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WBGene00013254 | SMap | S_parent | Sequence | Y57A10A | |||||
---|---|---|---|---|---|---|---|---|---|
Identity | Version | 2 | |||||||
Name | CGC_name | tag-276 | |||||||
Sequence_name | Y57A10A.9 | ||||||||
Molecular_name | Y57A10A.9 | ||||||||
Y57A10A.9.1 | |||||||||
CE22628 | |||||||||
Other_name | CELE_Y57A10A.9 | Accession_evidence | NDB | BX284602 | |||||
Public_name | tag-276 | ||||||||
DB_info | Database | AceView | gene | 2M538 | |||||
WormQTL | gene | WBGene00013254 | |||||||
WormFlux | gene | WBGene00013254 | |||||||
NDB | locus_tag | CELE_Y57A10A.9 | |||||||
NCBI | gene | 174865 | |||||||
RefSeq | protein | NM_064200.5 | |||||||
TREEFAM | TREEFAM_ID | TF319461 | |||||||
TrEMBL | UniProtAcc | Q9NA77 | |||||||
UniProt_GCRP | UniProtAcc | Q9NA77 | |||||||
Species | Caenorhabditis elegans | ||||||||
History | Version_change | 1 | 26 May 2004 16:54:54 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of WS125 | ||
2 | 22 Apr 2005 11:55:18 | WBPerson2970 | Name_change | CGC_name | tag-276 | ||||
Status | Live | ||||||||
Gene_info | Biotype | SO:0001217 | |||||||
Gene_class | tag | ||||||||
Allele (33) | |||||||||
Strain | WBStrain00036040 | ||||||||
RNASeq_FPKM (74) | |||||||||
Ortholog | WBGene00039899 | Caenorhabditis briggsae | From_analysis | OMA | |||||
WBGene00039898 | Caenorhabditis briggsae | From_analysis | OMA | ||||||
WBGene00158793 | Caenorhabditis brenneri | From_analysis | OMA | ||||||
WBGene00163233 | Caenorhabditis brenneri | From_analysis | OMA | ||||||
WBGene00079264 | Caenorhabditis remanei | From_analysis | TreeFam | ||||||
Csp11.Scaffold80.g505 | Caenorhabditis tropicalis | From_analysis | WormBase-Compara | ||||||
chrII_pilon.g6121 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||||
Paralog | WBGene00012841 | Caenorhabditis elegans | From_analysis | TreeFam | |||||
WBGene00012844 | Caenorhabditis elegans | From_analysis | TreeFam | ||||||
Structured_description | Automated_description | Enriched in AIZL; AIZR; C; germ line; and hypodermis based on tiling array; RNA-seq; and single-cell RNA-seq studies. Is affected by several genes including skn-1; glp-1; and dpy-10 based on microarray; tiling array; and RNA-seq studies. Is affected by seventeen chemicals including hydrogen sulfide; methylmercury hydroxide; and methylmercuric chloride based on microarray and RNA-seq studies. | Paper_evidence | WBPaper00065943 | |||||
Curator_confirmed | WBPerson324 | ||||||||
WBPerson37462 | |||||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
Molecular_info | Corresponding_CDS | Y57A10A.9 | |||||||
Corresponding_transcript | Y57A10A.9.1 | ||||||||
Associated_feature | WBsf650643 | ||||||||
WBsf990043 | |||||||||
WBsf224046 | |||||||||
Experimental_info | RNAi_result | WBRNAi00021102 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00057642 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00062468 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00037576 | Inferred_automatically | RNAi_primary | |||||||
Expr_pattern | Expr1014379 | ||||||||
Expr1035910 | |||||||||
Expr1161050 | |||||||||
Expr2017258 | |||||||||
Expr2035394 | |||||||||
Microarray_results (15) | |||||||||
Expression_cluster (157) | |||||||||
Interaction | WBInteraction000548598 | ||||||||
Map_info | Map | II | Position | 7.36411 | Error | 0.078339 | |||
Positive | Positive_clone | Y57A10A | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
Mapping_data | Multi_point | 5156 | |||||||
4686 | |||||||||
Pseudo_map_position | |||||||||
Reference | WBPaper00065331 | ||||||||
Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
Method | Gene |