WormBase Tree Display for Gene: WBGene00013303
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| WBGene00013303 | SMap | S_parent | Sequence | Y57G11C | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 1 | |||||||
| Name | Sequence_name | Y57G11C.5 | |||||||
| Molecular_name | Y57G11C.5a | ||||||||
| Y57G11C.5a.1 | |||||||||
| CE43636 | |||||||||
| Y57G11C.5b | |||||||||
| CE40536 | |||||||||
| Y57G11C.5c | |||||||||
| CE46167 | |||||||||
| Y57G11C.5b.1 | |||||||||
| Y57G11C.5c.1 | |||||||||
| Other_name | CELE_Y57G11C.5 | Accession_evidence | NDB | BX284604 | |||||
| Public_name | Y57G11C.5 | ||||||||
| DB_info | Database | AceView | gene | 4P520 | |||||
| WormQTL | gene | WBGene00013303 | |||||||
| WormFlux | gene | WBGene00013303 | |||||||
| NDB | locus_tag | CELE_Y57G11C.5 | |||||||
| NCBI | gene | 190371 | |||||||
| RefSeq | protein | NM_001268899.3 | |||||||
| NM_001268898.3 | |||||||||
| NM_001268897.3 | |||||||||
| TREEFAM | TREEFAM_ID | TF316135 | |||||||
| TrEMBL | UniProtAcc | G3MU87 | |||||||
| O18231 | |||||||||
| D3YTA3 | |||||||||
| UniProt_GCRP | UniProtAcc | O18231 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 26 May 2004 16:54:54 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of WS125 | ||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Allele (62) | |||||||||
| RNASeq_FPKM (74) | |||||||||
| Ortholog (25) | |||||||||
| Paralog | WBGene00013526 | Caenorhabditis elegans | From_analysis | TreeFam | |||||
| Inparanoid_8 | |||||||||
| WormBase-Compara | |||||||||
| Structured_description | Automated_description | Enriched in XXX cell; head neurons; sensory neurons; and in male based on RNA-seq and single-cell RNA-seq studies. Is affected by several genes including daf-16; daf-2; and skn-1 based on microarray; tiling array; and RNA-seq studies. Is affected by sixteen chemicals including methylmercuric chloride; manganese chloride; and D-glucose based on microarray and RNA-seq studies. Is predicted to encode a protein with the following domain: Serpin superfamily. | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | Y57G11C.5a | |||||||
| Y57G11C.5b | |||||||||
| Y57G11C.5c | |||||||||
| Corresponding_CDS_history | Y57G11C.5:wp131 | ||||||||
| Y57G11C.5:wp166 | |||||||||
| Y57G11C.5:wp201 | |||||||||
| Corresponding_transcript | Y57G11C.5a.1 | ||||||||
| Y57G11C.5b.1 | |||||||||
| Y57G11C.5c.1 | |||||||||
| Other_sequence | CRC08854_1 | ||||||||
| CR03057 | |||||||||
| Associated_feature | WBsf998624 | ||||||||
| WBsf998625 | |||||||||
| WBsf1018684 | |||||||||
| WBsf1018685 | |||||||||
| WBsf231211 | |||||||||
| Experimental_info | RNAi_result | WBRNAi00037609 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00021147 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00057706 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr1010273 | ||||||||
| Expr1035933 | |||||||||
| Expr1161131 | |||||||||
| Expr2008075 | |||||||||
| Expr2026314 | |||||||||
| Drives_construct | WBCnstr00029700 | ||||||||
| Construct_product | WBCnstr00029700 | ||||||||
| Microarray_results (23) | |||||||||
| Expression_cluster (162) | |||||||||
| Interaction | WBInteraction000238126 | ||||||||
| WBInteraction000253961 | |||||||||
| WBInteraction000299666 | |||||||||
| WBInteraction000387347 | |||||||||
| WBInteraction000397536 | |||||||||
| WBInteraction000445163 | |||||||||
| WBInteraction000455319 | |||||||||
| Map_info | Positive | Positive_clone | Y57G11C | Inferred_automatically | From sequence, transcript, pseudogene data | ||||
| Interpolated_map_position | IV | 12.4384 | |||||||
| Method | Gene |
