WormBase Tree Display for Gene: WBGene00013328

WBGene00013328 SMap: S_parent: Sequence: Y57G11C
  Identity: Version: 2
    Name: CGC_name: srlf-27 Person_evidence: WBPerson260
          Laboratory_evidence: OH
      Sequence_name: Y57G11C.39
      Molecular_name: Y57G11C.39
        Y57G11C.39.1
        CE35116
      Other_name: Y57G11C.39
        CELE_Y57G11C.39 Accession_evidence: NDB BX284604
      Public_name: srlf-27
    DB_info: Database: AceView gene 4P403
        WormQTL gene WBGene00013328
        WormFlux gene WBGene00013328
        NDB locus_tag CELE_Y57G11C.39
        Panther gene CAEEL|WormBase=WBGene00013328|UniProtKB=Q7YTI8
          family PTHR21593
        NCBI gene 3565944
        RefSeq protein NM_001028352.2
        TREEFAM TREEFAM_ID TF343665
        TrEMBL UniProtAcc Q7YTI8
        UniProt_GCRP UniProtAcc Q7YTI8
    Species: Caenorhabditis elegans
    History: Version_change: 1 26 May 2004 16:54:54 WBPerson1971 Event: Imported: Initial conversion from CDS class of WS125
        2 03 Oct 2022 15:59:20 WBPerson21950 Name_change: CGC_name: srlf-27
                Other_name: Y57G11C.39
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: srlf
    Allele (71)
    RNASeq_FPKM (74)
    Ortholog (24)
    Paralog (38)
    Structured_description: Automated_description: Enriched in several structures, including anterior hypodermis; arcade cell; male distal tip cell; mechanosensory neurons; and pharyngeal cell based on RNA-seq and single-cell RNA-seq studies. Is affected by several genes including daf-2; skn-1; and rrf-3 based on microarray; RNA-seq; and proteomic studies. Is affected by nine chemicals including methylmercuric chloride; stavudine; and Zidovudine based on microarray and RNA-seq studies. Is predicted to encode a protein with the following domains: SXP/RAL-2 family protein Ani s 5-like, metal-binding domain and SXP/RAL-2 family protein Ani s 5-like, cation-binding domain. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: Y57G11C.39
    Corresponding_transcript: Y57G11C.39.1
    Associated_feature: WBsf646564
  Experimental_info: Expr_pattern: Expr1023893
      Expr1035951
      Expr1161118
      Expr2008063
      Expr2026302
    Drives_construct: WBCnstr00029682
    Construct_product: WBCnstr00029682
    Microarray_results (13)
    Expression_cluster (85)
    Interaction: WBInteraction000568503
  Map_info: Map: IV Position: 12.2811
    Positive: Positive_clone: Y57G11C Inferred_automatically: From sequence, transcript, pseudogene data
    Pseudo_map_position
  Remark: Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. CGC_data_submission
  Method: Gene