WormBase Tree Display for Gene: WBGene00013494
expand all nodes | collapse all nodes | view schema
WBGene00013494 | SMap | S_parent | Sequence | Y70C5C | ||||||
---|---|---|---|---|---|---|---|---|---|---|
Identity | Version | 3 | ||||||||
Name | CGC_name | irld-58 | Person_evidence | WBPerson260 | ||||||
Sequence_name | Y70C5C.3 | |||||||||
Molecular_name | Y70C5C.3 | |||||||||
Other_name | CELE_Y70C5C.3 | Accession_evidence | NDB | BX284605 | ||||||
Public_name | irld-58 | |||||||||
DB_info | Database | AceView | gene | 5R190 | ||||||
WormQTL | gene | WBGene00013494 | ||||||||
WormFlux | gene | WBGene00013494 | ||||||||
NDB | locus_tag | CELE_Y70C5C.3 | ||||||||
NCBI | gene | 190568 | ||||||||
Species | Caenorhabditis elegans | |||||||||
History | Version_change | 1 | 26 May 2004 16:54:55 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of WS125 | |||
2 | 25 May 2012 15:57:08 | WBPerson2970 | Name_change | CGC_name | irld-58 | |||||
3 | 13 Nov 2017 16:58:57 | WBPerson4025 | Event | Changed_class | CDS | Pseudogene | ||||
Status | Live | |||||||||
Gene_info | Biotype | SO:0000336 | ||||||||
Gene_class | irld | |||||||||
Allele (59) | ||||||||||
RNASeq_FPKM (74) | ||||||||||
Ortholog | WBGene00028744 | Caenorhabditis briggsae | From_analysis | OrthoMCL | ||||||
WBGene00028747 | Caenorhabditis briggsae | From_analysis | OrthoMCL | |||||||
WBGene00028775 | Caenorhabditis briggsae | From_analysis | OrthoMCL | |||||||
WBGene00028774 | Caenorhabditis briggsae | From_analysis | OrthoMCL | |||||||
WBGene00028739 | Caenorhabditis briggsae | From_analysis | OrthoMCL | |||||||
WBGene00193469 | Caenorhabditis brenneri | From_analysis | TreeFam | |||||||
WBGene00065865 | Caenorhabditis remanei | From_analysis | TreeFam | |||||||
WBGene00028752 | Caenorhabditis briggsae | From_analysis | Inparanoid_8 | |||||||
WBGene00028753 | Caenorhabditis briggsae | From_analysis | Inparanoid_8 | |||||||
WBGene00207242 | Caenorhabditis japonica | From_analysis | Inparanoid_8 | |||||||
Paralog (74) | ||||||||||
Structured_description | Automated_description | Enriched in neurons based on RNA-seq studies. Is affected by cyc-1 and sir-2.1 based on microarray studies. | Paper_evidence | WBPaper00065943 | ||||||
Curator_confirmed | WBPerson324 | |||||||||
WBPerson37462 | ||||||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | |||||||||
Date_last_updated | 29 Nov 2023 00:00:00 | |||||||||
Molecular_info | Corresponding_CDS_history | Y70C5C.3:wp188 | ||||||||
Y70C5C.3:wp262 | ||||||||||
Corresponding_pseudogene | Y70C5C.3 | |||||||||
Experimental_info | Expr_pattern | Expr1013248 | ||||||||
Expr1161539 | ||||||||||
Expr2012857 | ||||||||||
Expr2031091 | ||||||||||
Microarray_results (13) | ||||||||||
Expression_cluster (13) | ||||||||||
Interaction (151) | ||||||||||
Map_info | Map | V | Position | 11.0685 | ||||||
Positive | Positive_clone | Y70C5C | Inferred_automatically | From sequence, transcript, pseudogene data | ||||||
Pseudo_map_position | ||||||||||
Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | ||||||||
Method | Gene |