WormBase Tree Display for Gene: WBGene00013496
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| WBGene00013496 | SMap | S_parent | Sequence | CHROMOSOME_X | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 2 | |||||||
| Name | CGC_name | npr-40 | Person_evidence | WBPerson11490 | |||||
| Laboratory_evidence | AX | ||||||||
| Sequence_name | Y70D2A.1 | ||||||||
| Molecular_name | Y70D2A.1 | ||||||||
| Y70D2A.1.1 | |||||||||
| CE34231 | |||||||||
| Y70D2A.1.2 | |||||||||
| Other_name | Y70D2A.1 | ||||||||
| CELE_Y70D2A.1 | Accession_evidence | NDB | BX284606 | ||||||
| Public_name | npr-40 | ||||||||
| DB_info | Database | AceView | gene | XP541 | |||||
| WormQTL | gene | WBGene00013496 | |||||||
| WormFlux | gene | WBGene00013496 | |||||||
| NDB | locus_tag | CELE_Y70D2A.1 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00013496|UniProtKB=G5EGH5 | |||||||
| family | PTHR47760 | ||||||||
| NCBI | gene | 190571 | |||||||
| RefSeq | protein | NM_001392893.1 | |||||||
| TREEFAM | TREEFAM_ID | TF315326 | |||||||
| TrEMBL | UniProtAcc | G5EGH5 | |||||||
| UniProt_GCRP | UniProtAcc | G5EGH5 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 26 May 2004 16:54:55 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of WS125 | ||
| 2 | 29 Sep 2022 22:37:18 | WBPerson21950 | Name_change | CGC_name | npr-40 | ||||
| Other_name | Y70D2A.1 | ||||||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | npr | ||||||||
| Allele (95) | |||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation | 00020225 | ||||||||
| 00120331 | |||||||||
| 00120332 | |||||||||
| 00120333 | |||||||||
| Ortholog (28) | |||||||||
| Paralog (187) | |||||||||
| Structured_description | Automated_description | Predicted to enable G protein-coupled receptor activity. Predicted to be involved in G protein-coupled receptor signaling pathway. Predicted to be located in membrane. | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | Y70D2A.1 | |||||||
| Corresponding_CDS_history | Y70D2A.1:wp102 | ||||||||
| Corresponding_transcript | Y70D2A.1.1 | ||||||||
| Y70D2A.1.2 | |||||||||
| Other_sequence (15) | |||||||||
| Associated_feature (13) | |||||||||
| Experimental_info | RNAi_result | WBRNAi00058121 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00037755 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00021360 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr1024398 | ||||||||
| Expr1161542 | |||||||||
| Expr2008266 | |||||||||
| Drives_construct | WBCnstr00029617 | ||||||||
| Construct_product | WBCnstr00029617 | ||||||||
| Microarray_results (19) | |||||||||
| Expression_cluster (153) | |||||||||
| Interaction | WBInteraction000320419 | ||||||||
| WBInteraction000431071 | |||||||||
| WBInteraction000462582 | |||||||||
| Map_info | Map | X | Position | 21.5696 | |||||
| Positive | Positive_clone | Y70D2A | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Pseudo_map_position | |||||||||
| Reference | WBPaper00065946 | ||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
