WormBase Tree Display for Gene: WBGene00013670
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| WBGene00013670 | SMap | S_parent | Sequence | Y105E8A | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 2 | |||||||
| Name | CGC_name | hpo-13 | Paper_evidence | WBPaper00038231 | |||||
| Person_evidence | WBPerson26 | ||||||||
| Sequence_name | Y105E8A.10 | ||||||||
| Molecular_name | Y105E8A.10a | ||||||||
| Y105E8A.10a.1 | |||||||||
| CE29831 | |||||||||
| Y105E8A.10b | |||||||||
| CE36895 | |||||||||
| Y105E8A.10c | |||||||||
| CE25174 | |||||||||
| Y105E8A.10b.1 | |||||||||
| Y105E8A.10c.1 | |||||||||
| Y105E8A.10c.2 | |||||||||
| Other_name | Y105E8E.l | Curator_confirmed | WBPerson1983 | ||||||
| Remark | Old cosmid naming mapped via unique overlapping PCR_product on CDSs | ||||||||
| CELE_Y105E8A.10 | Accession_evidence | NDB | BX284601 | ||||||
| Public_name | hpo-13 | ||||||||
| DB_info | Database (13) | ||||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 26 May 2004 16:54:55 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of WS125 | ||
| 2 | 26 Apr 2011 13:31:47 | WBPerson2970 | Name_change | CGC_name | hpo-13 | ||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | hpo | ||||||||
| Allele (339) | |||||||||
| Strain | WBStrain00031827 | ||||||||
| WBStrain00031838 | |||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation (13) | |||||||||
| Contained_in_operon | CEOP1904 | ||||||||
| Ortholog (35) | |||||||||
| Paralog | WBGene00019965 | Caenorhabditis elegans | From_analysis | TreeFam | |||||
| Panther | |||||||||
| WormBase-Compara | |||||||||
| Structured_description | Automated_description | Predicted to enable beta-glucosidase activity. Predicted to be involved in carbohydrate metabolic process and glucosylceramide catabolic process. Predicted to be located in membrane. Human ortholog(s) of this gene implicated in hereditary spastic paraplegia 46. Is an ortholog of human GBA2 (glucosylceramidase beta 2). | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Disease_info | Potential_model | DOID:0110798 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:18986) | ||||
| Molecular_info | Corresponding_CDS | Y105E8A.10a | |||||||
| Y105E8A.10b | |||||||||
| Y105E8A.10c | |||||||||
| Corresponding_transcript | Y105E8A.10a.1 | ||||||||
| Y105E8A.10b.1 | |||||||||
| Y105E8A.10c.1 | |||||||||
| Y105E8A.10c.2 | |||||||||
| Other_sequence (48) | |||||||||
| Associated_feature | WBsf643843 | ||||||||
| WBsf657095 | |||||||||
| WBsf986156 | |||||||||
| WBsf1011243 | |||||||||
| WBsf218795 | |||||||||
| Experimental_info | RNAi_result | WBRNAi00088627 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00088734 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00004480 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00004479 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00117014 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00002295 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00055213 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00036501 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr1025032 | ||||||||
| Expr1036102 | |||||||||
| Expr1158748 | |||||||||
| Expr2012558 | |||||||||
| Expr2030795 | |||||||||
| Microarray_results (30) | |||||||||
| Expression_cluster (63) | |||||||||
| SAGE_tag (14) | |||||||||
| Map_info | Map | I | Position | 25.6958 | Error | 0.004195 | |||
| Positive | Positive_clone | Y105E8A | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Pseudo_map_position | |||||||||
| Reference | WBPaper00038491 | ||||||||
| WBPaper00055090 | |||||||||
| WBPaper00064339 | |||||||||
| WBPaper00065998 | |||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
